Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812665

Identifier: 108812665

GI number: 108812665

Start: 2812050

End: 2812310

Strand: Reverse

Name: 108812665

Synonym: YPN_2504

Alternate gene names: NA

Gene position: 2812310-2812050 (Counterclockwise)

Preceding gene: 108812666

Following gene: 108812664

Centisome position: 62.02

GC content: 47.51

Gene sequence:

>261_bases
ATGGAGTTACTCGCCAACGAGGTGATCACCATTACCAGCACCGAGGATGAGATAAAAATCACCGCCAAGAAGAAGATAAC
GCTAAATGCAGGCGGCAGTTATATCACGCTGGATGAGAATCGGATCGAGTCAGGAACGGCGGGGGAATATTTGACTAAGG
CAGGGCATTACGGGCGAGTGGATAAGGCGAAATTGGAGACAGTAGTGCCAACATTAGCCGTTAAAGCTAAACCACCCACT
CAGAAGTATCCATTTTCTTAA

Upstream 100 bases:

>100_bases
GCAAAAATAAAACAGACCCTCTCAACAAGACTGTCATTTAAATTAGAAAAATAAAGAAATTGACAAAAATCGTCATAAAC
TTATTAACTTCCGGCTCCGG

Downstream 100 bases:

>100_bases
TTAAAGGATTAATCAATGATAATCAGCCCTCCTTTCTTGCGCGCAAAAATGTCGTCACAACCCGATGAAGAATGGGTAAG
CAGCATGATGCCGGCAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: VGR-Related Protein

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MELLANEVITITSTEDEIKITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGHYGRVDKAKLETVVPTLAVKAKPPT
QKYPFS

Sequences:

>Translated_86_residues
MELLANEVITITSTEDEIKITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGHYGRVDKAKLETVVPTLAVKAKPPT
QKYPFS
>Mature_86_residues
MELLANEVITITSTEDEIKITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGHYGRVDKAKLETVVPTLAVKAKPPT
QKYPFS

Specific function: Unknown

COG id: COG4253

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9369; Mature: 9369

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLANEVITITSTEDEIKITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGHYGRV
CCCCCCCEEEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHCCCCCCCC
DKAKLETVVPTLAVKAKPPTQKYPFS
CCHHHHEECCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MELLANEVITITSTEDEIKITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGHYGRV
CCCCCCCEEEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHCCCCCCCC
DKAKLETVVPTLAVKAKPPTQKYPFS
CCHHHHEECCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA