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The map label for this gene is ynfM [H]

Identifier: 108811900

GI number: 108811900

Start: 1958127

End: 1959245

Strand: Reverse

Name: ynfM [H]

Synonym: YPN_1738

Alternate gene names: 108811900

Gene position: 1959245-1958127 (Counterclockwise)

Preceding gene: 108811904

Following gene: 108811899

Centisome position: 43.21

GC content: 47.01

Gene sequence:

>1119_bases
GTGACTACTTCATTACACACTACAAACACTGTGGCGCCAGCATCAACAAAAAATGATGATGACACTGTTTTCACTACGAT
CCCTAAACTGCCTCCCCTAAATAAGCGTCCTTATATACAACAAGGTACGCCAGAATTCATCCGCGTTGCTCTGGCTTTAT
TTTCGGCGGGGTTAGCAACTTTCGCCCTGCTTTACTGCGTACAACCTATTTTGCCCATGTTGTCGCAGGACTTTAGTACC
TCTCCTGCGTCCAGCAGTTTGTCACTTTCGATAGCCACCGGGATGCTGGCGTTGGGTTTGATGTTTACCGGCCCCCTTTC
TGATGCGATAGGCCGAAAATCAGTCATGGTCGTGGCGTTGCTATTGGCCGCGGTTTGCACAATAGTTTGCTCTTTTATGA
CCAGTTGGCATGGGATTTTGCTAATGCGCGCATTGACCGGTCTATCCTTAAGCGGAGTTGCCGCGGTGGCAATGACCTAT
TTGAGTGAAGAGATCCATCCTAATTTTATTGCGCTATCAATGGGGTTGTATATCAGCGGTAGTTCTATTGGTGGCATGAG
TGGGCGTTTGGTGGCTGGGGTATTAAGCGATCTCTTTTCCTGGCGCGTATCACTGCTAGTACTCGGATTATTTGCTTTAG
CTGCTGCTTGCTTGTTTTGGTTTATCCTCCCAGCGTCTAAACACTTTCGTGCAAGTTCATTGCGCCCCAGAACGTTGTTA
ATCAATTTTAAACTGCACTGGCGTGACTCCGGCTTACCCCTACTATTTGCTGAAGGTTTTCTCATTATGGGGGGGGTCGT
CACCTTATTTAATTATATCGGCTATCGGTTACTGGATGGGCCTTATTATCTCAGCCCGACCATCGTAGGGCTATTATCCA
TTGTTTATTTAACGGGTTCTTATAGTTCACCTAAAGCGGGTTCACTCAGTAATCGCTACGGGCGAGGCCTAATTTTATTG
GCCTCTATCGGTATGATGTTGGTTGGTGTTGTGATCACCAGTTTTCCGTCAGTGATCATGATTTTTATTGGTATGATGTT
CGTTGCAGCAGGATTCTTTGCCGCTCACTCCGTTGTCAGTAGCTGGGTTGGTTGCAGAGCACGTCGTGCTAAGGCATAA

Upstream 100 bases:

>100_bases
TGAGTTAACTTGCTTGCGTACTAATTTAACCGTGTACTAATTTAACTGTATATTAATTTAACTGTGTACTAATTTGGCTA
TGTATTAATAAGGCTATACC

Downstream 100 bases:

>100_bases
GCTTCGTCACTTTATCTGTTTTGTTACTATGCCGGTTCCAGCGTAGCCGGTACGTTAGGTGGCGTTTTTTGGTTACATTT
AGGCTGGACAGGTGTTGTTG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTTSLHTTNTVAPASTKNDDDTVFTTIPKLPPLNKRPYIQQGTPEFIRVALALFSAGLATFALLYCVQPILPMLSQDFST
SPASSSLSLSIATGMLALGLMFTGPLSDAIGRKSVMVVALLLAAVCTIVCSFMTSWHGILLMRALTGLSLSGVAAVAMTY
LSEEIHPNFIALSMGLYISGSSIGGMSGRLVAGVLSDLFSWRVSLLVLGLFALAAACLFWFILPASKHFRASSLRPRTLL
INFKLHWRDSGLPLLFAEGFLIMGGVVTLFNYIGYRLLDGPYYLSPTIVGLLSIVYLTGSYSSPKAGSLSNRYGRGLILL
ASIGMMLVGVVITSFPSVIMIFIGMMFVAAGFFAAHSVVSSWVGCRARRAKA

Sequences:

>Translated_372_residues
MTTSLHTTNTVAPASTKNDDDTVFTTIPKLPPLNKRPYIQQGTPEFIRVALALFSAGLATFALLYCVQPILPMLSQDFST
SPASSSLSLSIATGMLALGLMFTGPLSDAIGRKSVMVVALLLAAVCTIVCSFMTSWHGILLMRALTGLSLSGVAAVAMTY
LSEEIHPNFIALSMGLYISGSSIGGMSGRLVAGVLSDLFSWRVSLLVLGLFALAAACLFWFILPASKHFRASSLRPRTLL
INFKLHWRDSGLPLLFAEGFLIMGGVVTLFNYIGYRLLDGPYYLSPTIVGLLSIVYLTGSYSSPKAGSLSNRYGRGLILL
ASIGMMLVGVVITSFPSVIMIFIGMMFVAAGFFAAHSVVSSWVGCRARRAKA
>Mature_371_residues
TTSLHTTNTVAPASTKNDDDTVFTTIPKLPPLNKRPYIQQGTPEFIRVALALFSAGLATFALLYCVQPILPMLSQDFSTS
PASSSLSLSIATGMLALGLMFTGPLSDAIGRKSVMVVALLLAAVCTIVCSFMTSWHGILLMRALTGLSLSGVAAVAMTYL
SEEIHPNFIALSMGLYISGSSIGGMSGRLVAGVLSDLFSWRVSLLVLGLFALAAACLFWFILPASKHFRASSLRPRTLLI
NFKLHWRDSGLPLLFAEGFLIMGGVVTLFNYIGYRLLDGPYYLSPTIVGLLSIVYLTGSYSSPKAGSLSNRYGRGLILLA
SIGMMLVGVVITSFPSVIMIFIGMMFVAAGFFAAHSVVSSWVGCRARRAKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=366, Percent_Identity=66.120218579235, Blast_Score=489, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39738; Mature: 39607

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSLHTTNTVAPASTKNDDDTVFTTIPKLPPLNKRPYIQQGTPEFIRVALALFSAGLAT
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FALLYCVQPILPMLSQDFSTSPASSSLSLSIATGMLALGLMFTGPLSDAIGRKSVMVVAL
HHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHH
LLAAVCTIVCSFMTSWHGILLMRALTGLSLSGVAAVAMTYLSEEIHPNFIALSMGLYISG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECEEEEC
SSIGGMSGRLVAGVLSDLFSWRVSLLVLGLFALAAACLFWFILPASKHFRASSLRPRTLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
INFKLHWRDSGLPLLFAEGFLIMGGVVTLFNYIGYRLLDGPYYLSPTIVGLLSIVYLTGS
EEEEEEEECCCCCEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
YSSPKAGSLSNRYGRGLILLASIGMMLVGVVITSFPSVIMIFIGMMFVAAGFFAAHSVVS
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWVGCRARRAKA
HHHHHHHHCCCC
>Mature Secondary Structure 
TTSLHTTNTVAPASTKNDDDTVFTTIPKLPPLNKRPYIQQGTPEFIRVALALFSAGLAT
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FALLYCVQPILPMLSQDFSTSPASSSLSLSIATGMLALGLMFTGPLSDAIGRKSVMVVAL
HHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHH
LLAAVCTIVCSFMTSWHGILLMRALTGLSLSGVAAVAMTYLSEEIHPNFIALSMGLYISG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECEEEEC
SSIGGMSGRLVAGVLSDLFSWRVSLLVLGLFALAAACLFWFILPASKHFRASSLRPRTLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
INFKLHWRDSGLPLLFAEGFLIMGGVVTLFNYIGYRLLDGPYYLSPTIVGLLSIVYLTGS
EEEEEEEECCCCCEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
YSSPKAGSLSNRYGRGLILLASIGMMLVGVVITSFPSVIMIFIGMMFVAAGFFAAHSVVS
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWVGCRARRAKA
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]