Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811878

Identifier: 108811878

GI number: 108811878

Start: 1932792

End: 1932944

Strand: Reverse

Name: 108811878

Synonym: YPN_1716

Alternate gene names: NA

Gene position: 1932944-1932792 (Counterclockwise)

Preceding gene: 108811884

Following gene: 108811877

Centisome position: 42.63

GC content: 48.37

Gene sequence:

>153_bases
ATGTTCAAAGATTACCGTTTAAGAGCGAACCATTGGGGCGGTCAGTCGTTTGAGTTTTATTCTCTGGTGGTCGTCTCTTT
GCTGTTACCGGATTTGTCCGTATTGACACTGGCAACACCATGGCCGAGCCAACGCTGCCTATGGCCATATTGA

Upstream 100 bases:

>100_bases
CCGTATAAAATATCAATATGGCTCACCACTAAGGCTTTATAATATTTATTATCGCATTACCCCTCTATTAAATTTCAACG
CACTTTAGCTAAAAAAAGAA

Downstream 100 bases:

>100_bases
TATAAATGACCAAGAGCGCATTCGCGGGTTAAGCCAGGAGAATAGAAAGAGGGTATGATATCTTATTACTGAATACCTCT
AATGAGCAGATTAAAAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 50

Protein sequence:

>50_residues
MFKDYRLRANHWGGQSFEFYSLVVVSLLLPDLSVLTLATPWPSQRCLWPY

Sequences:

>Translated_50_residues
MFKDYRLRANHWGGQSFEFYSLVVVSLLLPDLSVLTLATPWPSQRCLWPY
>Mature_50_residues
MFKDYRLRANHWGGQSFEFYSLVVVSLLLPDLSVLTLATPWPSQRCLWPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5903; Mature: 5903

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKDYRLRANHWGGQSFEFYSLVVVSLLLPDLSVLTLATPWPSQRCLWPY
CCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MFKDYRLRANHWGGQSFEFYSLVVVSLLLPDLSVLTLATPWPSQRCLWPY
CCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA