Click here to switch to the map view.

The map label for this gene is yciI [H]

Identifier: 108811822

GI number: 108811822

Start: 1877448

End: 1877744

Strand: Reverse

Name: yciI [H]

Synonym: YPN_1660

Alternate gene names: 108811822

Gene position: 1877744-1877448 (Counterclockwise)

Preceding gene: 108811824

Following gene: 108811821

Centisome position: 41.41

GC content: 47.47

Gene sequence:

>297_bases
ATGTTTTACGTCATATTTGCTACAGATGTACCTAACTCATTGGAGAAGCGAATGTCTGTGCGTCCTGCGCATTTGGCTCG
CTTACAGGCTTTACAGGATCAAGGCCGTTTACTGACCGCTGGACCTAACCCAGCCATCGACAGTGCCGATCCCGGTAATG
CCGGCTTTACTGGCTCGACAGTGATTGCTGACTTTTCCTCATTGCAAGAAGCTGAGATATGGGCTGAACAAGATCCTTAT
GTTGCCGCAGGTGTTTACCAGTCGGTAATTATTAAACCCTTTAAACGGGTGTTTTGA

Upstream 100 bases:

>100_bases
ACACCCATTGTTAGCTTTCCCATGGTTGTATTCGTGAGTGTAACATGCTGTTATTGAACACCATTGATAACTATCATTAT
TATGATTTTAAAGGTGAAAA

Downstream 100 bases:

>100_bases
ATCTAAAAGTCATTCTCCCTACGCGTGTAGCCAGCGGGTATCAACTCCGAGATATACGCGTTGCTCTCTACAATCATCCT
CCCTACAATCATGAATTTTA

Product: YciI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MFYVIFATDVPNSLEKRMSVRPAHLARLQALQDQGRLLTAGPNPAIDSADPGNAGFTGSTVIADFSSLQEAEIWAEQDPY
VAAGVYQSVIIKPFKRVF

Sequences:

>Translated_98_residues
MFYVIFATDVPNSLEKRMSVRPAHLARLQALQDQGRLLTAGPNPAIDSADPGNAGFTGSTVIADFSSLQEAEIWAEQDPY
VAAGVYQSVIIKPFKRVF
>Mature_98_residues
MFYVIFATDVPNSLEKRMSVRPAHLARLQALQDQGRLLTAGPNPAIDSADPGNAGFTGSTVIADFSSLQEAEIWAEQDPY
VAAGVYQSVIIKPFKRVF

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yciI family [H]

Homologues:

Organism=Escherichia coli, GI87081861, Length=98, Percent_Identity=72.4489795918367, Blast_Score=153, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR005545 [H]

Pfam domain/function: PF03795 YCII [H]

EC number: NA

Molecular weight: Translated: 10684; Mature: 10684

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYVIFATDVPNSLEKRMSVRPAHLARLQALQDQGRLLTAGPNPAIDSADPGNAGFTGST
CEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCH
VIADFSSLQEAEIWAEQDPYVAAGVYQSVIIKPFKRVF
HHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFYVIFATDVPNSLEKRMSVRPAHLARLQALQDQGRLLTAGPNPAIDSADPGNAGFTGST
CEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCH
VIADFSSLQEAEIWAEQDPYVAAGVYQSVIIKPFKRVF
HHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]