Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811592

Identifier: 108811592

GI number: 108811592

Start: 1625429

End: 1626766

Strand: Reverse

Name: 108811592

Synonym: YPN_1429

Alternate gene names: NA

Gene position: 1626766-1625429 (Counterclockwise)

Preceding gene: 108811593

Following gene: 108811591

Centisome position: 35.87

GC content: 47.31

Gene sequence:

>1338_bases
ATGCAGTCTGTACCCTCTATTTTTGTGAGTATTGCAAGTTACCGGGATCCTGAGTTGATCCCCACCTTGCATGACATGAT
AAATACCGCAGAGCGCCCCGAAAATCTTAATATTGCGATTTTTTGGCAAAATGATAATGACATTAATACCTTCTTAAATC
AGGGAATGCAGTTGATTGAGCGTACAACTCATCAGGGCTATCCACTGTACCAGTTGGAATACAACCGGGCGCGGGTGTCG
GTACTCAGTGTGCATTACTATGAAAGTAGAGGGGCATGCTGGGCCAGGCACATGGCCGAAACCTTGTTCCAGGATGAAGC
ATTCTTTTTGCAGATCGATTCTCACTGTCGTTTCATTCCACACTGGGATCACGAAATGATCGCGATGTTGGATAGTCTGC
GCGCCGAAAGCCCTAAGCCTATCCTCTCCAGCTACCCGCCTGCGTATGAACCCGGTGAGAATGAGATTCGGAAAGATTAT
GTCAGCCGCATGATATTTAATCTCTTTACGCAGGAAGGTATCGTGCAAATGCTATCAACCACCATCACCGAAACGGCCCC
CGTGCGTTGTGGTTATCTGGCGGGGGGGTTTATTTTTAGTGACGGTAGTTTTGCCAGAGAGGTGCCCAACGATCCCAATA
TTTTCTTTATTGGCGAAGAAATTGCCATGGCAGCGCGTGCCTTTACCCATGGCTATGACATTTACGCCCCACACAAAATT
CTGCTCTGGCATTTCTATACCCGCTCGGAGCACAGTAAGGTTTGGTCAGATCACAATAATGAAGCCAAAGAAACGGGTGC
AGTAGATATGGCCTGGTGGGAGCGCGATAAAATTGCGAAAGACCGGATTTGTATCCTGTTAGATGGCGATAAAGATCACC
GCGTACTCGTCCCCTATACCTTGGGTACCCAGCGTTCATTGTCGGAATTCGAATACCGTCTGGGCATCAATATTAAAAAC
CGGGCGGTGCATCCTGATGCTGCGGGTGAAAAAAAAGTGAGTTTCTTCACTGATCTTCCCACATCCCATGAAGACTGGCT
TTCCTCCCTGATTAGTGTGAATAAAAAAACACTAAAAGTGGAAAAGAAAGAGGTGGACTTCACACGAGAAGATGTGGAGT
GGTGGCACATTGGCGTTTATAACCCGCAAAATGTCGCCGTTATGGTGGAAAAAGTTGACCCGCAGAACATGAGCAAAACG
GTTACCCCCGTTGACGAAGCTACCTTTGAGTTGAAGTTGGCCTTTAATACTCAAACCCATCCGAATGCACAAACAATTAG
AATATGTCCTTACATGCGAACGCAGGGGTGGGGAGATGTCGTGGAGAAACCCTGGTGA

Upstream 100 bases:

>100_bases
GAATAAACCGGCTATTGGTAATTTTTCCGCGATGGCAGAAATTATTCTGCAGATAAAATAACCCCATTCGGCAGCACGTT
AAATTTTACACGGATTATAT

Downstream 100 bases:

>100_bases
GCAGCGCAGATATTTTTAAAAAGATTTTAAGTATTGACACCTTATTATCATTCGATGGTGTCATCCCTTCTTTATCCGAG
TTTCAGCTAAAGCTGGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIERTTHQGYPLYQLEYNRARVS
VLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIPHWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDY
VSRMIFNLFTQEGIVQMLSTTITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI
LLWHFYTRSEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRICILLDGDKDHRVLVPYTLGTQRSLSEFEYRLGINIKN
RAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKVEKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNMSKT
VTPVDEATFELKLAFNTQTHPNAQTIRICPYMRTQGWGDVVEKPW

Sequences:

>Translated_445_residues
MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIERTTHQGYPLYQLEYNRARVS
VLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIPHWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDY
VSRMIFNLFTQEGIVQMLSTTITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI
LLWHFYTRSEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRICILLDGDKDHRVLVPYTLGTQRSLSEFEYRLGINIKN
RAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKVEKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNMSKT
VTPVDEATFELKLAFNTQTHPNAQTIRICPYMRTQGWGDVVEKPW
>Mature_445_residues
MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIERTTHQGYPLYQLEYNRARVS
VLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIPHWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDY
VSRMIFNLFTQEGIVQMLSTTITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI
LLWHFYTRSEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRICILLDGDKDHRVLVPYTLGTQRSLSEFEYRLGINIKN
RAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKVEKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNMSKT
VTPVDEATFELKLAFNTQTHPNAQTIRICPYMRTQGWGDVVEKPW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51494; Mature: 51494

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIE
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
RTTHQGYPLYQLEYNRARVSVLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIP
HHHCCCCCEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
HWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDYVSRMIFNLFTQEGIVQMLST
CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI
HHCCCCCCEEEEEECCEEECCCCHHHCCCCCCCEEEECHHHHHHHHHHHCCCCEECCCEE
LLWHFYTRSEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRICILLDGDKDHRVLVPYT
EEEEEEECCCCHHHHCCCCCCHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEE
LGTQRSLSEFEYRLGINIKNRAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKV
CCCCCCHHHHHEEECCEECCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHEEE
EKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNMSKTVTPVDEATFELKLAFNTQTH
EHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCC
PNAQTIRICPYMRTQGWGDVVEKPW
CCCCEEEEECCCCCCCCCHHHCCCC
>Mature Secondary Structure
MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIE
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
RTTHQGYPLYQLEYNRARVSVLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIP
HHHCCCCCEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
HWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDYVSRMIFNLFTQEGIVQMLST
CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKI
HHCCCCCCEEEEEECCEEECCCCHHHCCCCCCCEEEECHHHHHHHHHHHCCCCEECCCEE
LLWHFYTRSEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRICILLDGDKDHRVLVPYT
EEEEEEECCCCHHHHCCCCCCHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEE
LGTQRSLSEFEYRLGINIKNRAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKV
CCCCCCHHHHHEEECCEECCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHEEE
EKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNMSKTVTPVDEATFELKLAFNTQTH
EHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCC
PNAQTIRICPYMRTQGWGDVVEKPW
CCCCEEEEECCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA