| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
Click here to switch to the map view.
The map label for this gene is 108810967
Identifier: 108810967
GI number: 108810967
Start: 935284
End: 935448
Strand: Reverse
Name: 108810967
Synonym: YPN_0802
Alternate gene names: NA
Gene position: 935448-935284 (Counterclockwise)
Preceding gene: 108810973
Following gene: 108810965
Centisome position: 20.63
GC content: 39.39
Gene sequence:
>165_bases TTGCAATATAAAAAGCCCGAAAATTTTACTCATTTTGGCGAAAAAAGCAATCTAAAGCGTAGATTCCTGTTCGCACATTT TGTACTGAGTACCATTTTCATCGTTTACCGCCATTTTCTGCGGGAAATCTATACTCACTTCACACCGGTTAACGCCACAG TGTGA
Upstream 100 bases:
>100_bases ACGGACGCTTTTTAGCGCCGCCACGAGCCAAACGAATTGTTACCATAACATCCTCTTTAGTTAATAAAACAACTGGACCC CATCGGGGAACGGGGTCCAG
Downstream 100 bases:
>100_bases GATGGCTTTTAGCGACCTGGGAACCCGGGTGGCATCATACCTTTCATGCCACGCATCATTTTGGCCAAACCGCCGTTTTT CATTTTCTTCATCATGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MQYKKPENFTHFGEKSNLKRRFLFAHFVLSTIFIVYRHFLREIYTHFTPVNATV
Sequences:
>Translated_54_residues MQYKKPENFTHFGEKSNLKRRFLFAHFVLSTIFIVYRHFLREIYTHFTPVNATV >Mature_54_residues MQYKKPENFTHFGEKSNLKRRFLFAHFVLSTIFIVYRHFLREIYTHFTPVNATV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6622; Mature: 6622
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYKKPENFTHFGEKSNLKRRFLFAHFVLSTIFIVYRHFLREIYTHFTPVNATV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQYKKPENFTHFGEKSNLKRRFLFAHFVLSTIFIVYRHFLREIYTHFTPVNATV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA