| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801915
Identifier: 108801915
GI number: 108801915
Start: 5243401
End: 5245137
Strand: Reverse
Name: 108801915
Synonym: Mmcs_4952
Alternate gene names: NA
Gene position: 5245137-5243401 (Counterclockwise)
Preceding gene: 108801916
Following gene: 108801912
Centisome position: 91.93
GC content: 74.55
Gene sequence:
>1737_bases GTGAGCCGGGATTCGGTCGTCGTGGCCGGGTGCGATGTCGGCAACCACACCACCGAGATCGTGCTCGCCCGCGTCGCCGC CGACGGTGTGGTCGAGCCGTTGACGCACGGGCAGGCCCCCACCCGGGGGCGCAAGGGGTCGACCGAGTCGCTCGAAGGCG CCGCGGCGCTGCTGAACCGCCTCGAGGTCGAGGCCCGGGTGCGCGTCGACGAGGTGGTGCTCGCGACGATCCGCCCGGTG GACACCGCGACCGCCCCGCTGGCCCCGGCGGTGTCCCCGCGTGCGCCGGTGCGCAGCCTGCGCCGACCCGATGCCAGCAC GCCCGCGGGGGCCGGCCACGGTGTCGGCACGCATGTGCCGCTGGCCGACCTGTCCGGTCCGGTGCATCCCGGCCCGGTGA TCGTATCCGTCTCGGCAGCAACCGATTTCGAGGTTGCCGCGCAGGCGATCGGCGACGGGGTGGCGTCCGGCTGGAAGATC GCAGGCGTGCTCGTCGCCCAGGACGATGCGGTGCTCATCCGCAACCGCATCCCCATCGACGTCCCCGTGGTCGACGAGGT CGAGCTCGACGGTCTGCGCCGGGGCGCGCTCGTGGCGGTCGAGGTGGTCGCCGAGGGTCGGGCGTACCGGGCGCTGGCCG ATCCGATCGCCCTGTCGGCGGCGCTGCAACTCGGCCACGACCGGCTGCTCGACGTCGCCGAGTTCACCCGCGAGTTGGCC GACGCCCCGGCGATCGCCGTCACCGCGCGCACCGAACCACCGGATCCGCCCGCGGTGGACGACGACTACGTCGACTGCCG TATCGGCGGTGAGATCGTCCGGTATGCGCCCGCCGCGGCGCACACTGTTCTGCGGCTGGAGCCGCCGGGTTGCGCGGTCG AGGTCCGGCTGAGCGCGTTGCCCGCCGCGGAGAACGGCATCGCGGTCGACGATGCGTTCTTCACCGACCTGGCGTCGATC GACAACGGTGCGTGGTTGCGGCGCGGCGTGGCCGACGCCCGCGGCACCGTCGTCGCCCTGTTGGCCGCTGAGCCCGTCAC CGACGCCGCCGCAACGCTTTCCGGGCTCACCGGCCGCCCCGCGCGGACCGTGGCCGGCGAACCCGCGGCGGCCGCGCGCG GTGCGCAGACCACACCGGGGCTGCCGCCGGGGTCGGTGGTGTGCGATATCGGCGGCGGCACAGTCGATCTGATCGGGCAG GGCCGCACGGTCACCGCTGCCGGCGCCGGCGAGACGATCACCACCGCGGTCTCCCGGGTGCTCGGGATTCCGCGCGCCCT GGCCGAGCGGGTCAAACGGACACCGGCGCTGCGGGTGGAGGGTCCGCATGTCGCCCACGAGGAGGACGGCCGCCGGGTGT TCCTCGACAGCCCGGCGTCCGCCGACGCGATCGGCCGGTTGTGCACCCGCGGCAGTGCCGGGCTGGTGCCGTTCTCGCAC CGGTTGGCGGCCGAGGAGTGGCGCAGCCTGCGGCTGGCGATCAAACAGCAGACGGTCGCGGCGAACATCGCGCGGTGCCT GGCGACGTTCGACGAACCGCCGAGCGCGCTGGTGCTGGCCGGTGGCGGTGCGCTCGACGACGAACTGCTGCGGACGGTGG GCGAGTCGTTACGGCCGGCGCGGGTCGTGGTGGGCCGGGCCGACATCGACGGGGTGCACGGTCCGCGGTTCGCGGTGGCC TCCGGTCTGGTGCACCTCTACGCCGAGGACCGGGTGGGGTCGACCTCGCCCGCGTGA
Upstream 100 bases:
>100_bases TGGAGGAGTTGCGGGTGTCGCTGGAGACCGGCGGGGCATCGCGGTGCGCCGAACTCGTCCGCCAGGCCGCCGAGGTCTAC GCGAGACGAGGTCTGTTGCG
Downstream 100 bases:
>100_bases GGACGCCTCAGGCGGCGGGCTGGTCCTTCTCGTCGGTGCTGGTGTCGCTGTCGGTACCGGTGGTGCCGTTGTCGGCGGGG TCGTTCGTCGCGGAGTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycerol Dehydratase Reactivation Factor Large Subunit; Propanediol Utilization ATPase; Diol Dehydratase Reactivation Protein; Glycerol Dehydratase Reactivation Factor
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MSRDSVVVAGCDVGNHTTEIVLARVAADGVVEPLTHGQAPTRGRKGSTESLEGAAALLNRLEVEARVRVDEVVLATIRPV DTATAPLAPAVSPRAPVRSLRRPDASTPAGAGHGVGTHVPLADLSGPVHPGPVIVSVSAATDFEVAAQAIGDGVASGWKI AGVLVAQDDAVLIRNRIPIDVPVVDEVELDGLRRGALVAVEVVAEGRAYRALADPIALSAALQLGHDRLLDVAEFTRELA DAPAIAVTARTEPPDPPAVDDDYVDCRIGGEIVRYAPAAAHTVLRLEPPGCAVEVRLSALPAAENGIAVDDAFFTDLASI DNGAWLRRGVADARGTVVALLAAEPVTDAAATLSGLTGRPARTVAGEPAAAARGAQTTPGLPPGSVVCDIGGGTVDLIGQ GRTVTAAGAGETITTAVSRVLGIPRALAERVKRTPALRVEGPHVAHEEDGRRVFLDSPASADAIGRLCTRGSAGLVPFSH RLAAEEWRSLRLAIKQQTVAANIARCLATFDEPPSALVLAGGGALDDELLRTVGESLRPARVVVGRADIDGVHGPRFAVA SGLVHLYAEDRVGSTSPA
Sequences:
>Translated_578_residues MSRDSVVVAGCDVGNHTTEIVLARVAADGVVEPLTHGQAPTRGRKGSTESLEGAAALLNRLEVEARVRVDEVVLATIRPV DTATAPLAPAVSPRAPVRSLRRPDASTPAGAGHGVGTHVPLADLSGPVHPGPVIVSVSAATDFEVAAQAIGDGVASGWKI AGVLVAQDDAVLIRNRIPIDVPVVDEVELDGLRRGALVAVEVVAEGRAYRALADPIALSAALQLGHDRLLDVAEFTRELA DAPAIAVTARTEPPDPPAVDDDYVDCRIGGEIVRYAPAAAHTVLRLEPPGCAVEVRLSALPAAENGIAVDDAFFTDLASI DNGAWLRRGVADARGTVVALLAAEPVTDAAATLSGLTGRPARTVAGEPAAAARGAQTTPGLPPGSVVCDIGGGTVDLIGQ GRTVTAAGAGETITTAVSRVLGIPRALAERVKRTPALRVEGPHVAHEEDGRRVFLDSPASADAIGRLCTRGSAGLVPFSH RLAAEEWRSLRLAIKQQTVAANIARCLATFDEPPSALVLAGGGALDDELLRTVGESLRPARVVVGRADIDGVHGPRFAVA SGLVHLYAEDRVGSTSPA >Mature_577_residues SRDSVVVAGCDVGNHTTEIVLARVAADGVVEPLTHGQAPTRGRKGSTESLEGAAALLNRLEVEARVRVDEVVLATIRPVD TATAPLAPAVSPRAPVRSLRRPDASTPAGAGHGVGTHVPLADLSGPVHPGPVIVSVSAATDFEVAAQAIGDGVASGWKIA GVLVAQDDAVLIRNRIPIDVPVVDEVELDGLRRGALVAVEVVAEGRAYRALADPIALSAALQLGHDRLLDVAEFTRELAD APAIAVTARTEPPDPPAVDDDYVDCRIGGEIVRYAPAAAHTVLRLEPPGCAVEVRLSALPAAENGIAVDDAFFTDLASID NGAWLRRGVADARGTVVALLAAEPVTDAAATLSGLTGRPARTVAGEPAAAARGAQTTPGLPPGSVVCDIGGGTVDLIGQG RTVTAAGAGETITTAVSRVLGIPRALAERVKRTPALRVEGPHVAHEEDGRRVFLDSPASADAIGRLCTRGSAGLVPFSHR LAAEEWRSLRLAIKQQTVAANIARCLATFDEPPSALVLAGGGALDDELLRTVGESLRPARVVVGRADIDGVHGPRFAVAS GLVHLYAEDRVGSTSPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59256; Mature: 59124
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDSVVVAGCDVGNHTTEIVLARVAADGVVEPLTHGQAPTRGRKGSTESLEGAAALLNR CCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH LEVEARVRVDEVVLATIRPVDTATAPLAPAVSPRAPVRSLRRPDASTPAGAGHGVGTHVP HHHHHHEEHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC LADLSGPVHPGPVIVSVSAATDFEVAAQAIGDGVASGWKIAGVLVAQDDAVLIRNRIPID HHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCC VPVVDEVELDGLRRGALVAVEVVAEGRAYRALADPIALSAALQLGHDRLLDVAEFTRELA CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH DAPAIAVTARTEPPDPPAVDDDYVDCRIGGEIVRYAPAAAHTVLRLEPPGCAVEVRLSAL CCCEEEEEECCCCCCCCCCCCCCEEEEECCHHEECCCHHHEEEEEECCCCCEEEEEEEEC PAAENGIAVDDAFFTDLASIDNGAWLRRGVADARGTVVALLAAEPVTDAAATLSGLTGRP CCCCCCCEECHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCC ARTVAGEPAAAARGAQTTPGLPPGSVVCDIGGGTVDLIGQGRTVTAAGAGETITTAVSRV CCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEEECCCCCHHHHHHHHH LGIPRALAERVKRTPALRVEGPHVAHEEDGRRVFLDSPASADAIGRLCTRGSAGLVPFSH HCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHH RLAAEEWRSLRLAIKQQTVAANIARCLATFDEPPSALVLAGGGALDDELLRTVGESLRPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCE RVVVGRADIDGVHGPRFAVASGLVHLYAEDRVGSTSPA EEEEECCCCCCCCCCHHHHHHCEEEEEECCCCCCCCCC >Mature Secondary Structure SRDSVVVAGCDVGNHTTEIVLARVAADGVVEPLTHGQAPTRGRKGSTESLEGAAALLNR CCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH LEVEARVRVDEVVLATIRPVDTATAPLAPAVSPRAPVRSLRRPDASTPAGAGHGVGTHVP HHHHHHEEHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC LADLSGPVHPGPVIVSVSAATDFEVAAQAIGDGVASGWKIAGVLVAQDDAVLIRNRIPID HHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCC VPVVDEVELDGLRRGALVAVEVVAEGRAYRALADPIALSAALQLGHDRLLDVAEFTRELA CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH DAPAIAVTARTEPPDPPAVDDDYVDCRIGGEIVRYAPAAAHTVLRLEPPGCAVEVRLSAL CCCEEEEEECCCCCCCCCCCCCCEEEEECCHHEECCCHHHEEEEEECCCCCEEEEEEEEC PAAENGIAVDDAFFTDLASIDNGAWLRRGVADARGTVVALLAAEPVTDAAATLSGLTGRP CCCCCCCEECHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCC ARTVAGEPAAAARGAQTTPGLPPGSVVCDIGGGTVDLIGQGRTVTAAGAGETITTAVSRV CCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEEECCCCCHHHHHHHHH LGIPRALAERVKRTPALRVEGPHVAHEEDGRRVFLDSPASADAIGRLCTRGSAGLVPFSH HCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHH RLAAEEWRSLRLAIKQQTVAANIARCLATFDEPPSALVLAGGGALDDELLRTVGESLRPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCE RVVVGRADIDGVHGPRFAVASGLVHLYAEDRVGSTSPA EEEEECCCCCCCCCCHHHHHHCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA