Click here to switch to the map view.

The map label for this gene is 108801886

Identifier: 108801886

GI number: 108801886

Start: 5212165

End: 5214978

Strand: Reverse

Name: 108801886

Synonym: Mmcs_4923

Alternate gene names: NA

Gene position: 5214978-5212165 (Counterclockwise)

Preceding gene: 108801887

Following gene: 108801885

Centisome position: 91.4

GC content: 70.33

Gene sequence:

>2814_bases
ATGGCGAGCCAAGAGCGGGGACGACTGCTGTACGGCCGCGCCGTCGAGACCGCCGCACTGCGGCGGGTGATCGCGGCGGT
GCGGACGGGCCGGTCGCAGGTGCTGGTGCTGCGCGGTGAGCCGGGTGCCGGTAAGACCGCCCTGCTCGGCTACCTGCTCG
ACGAGGCGCCGGGTTGGCGCTGTGTGCACGTGGCGGGCGTCGAATCCGATATGGAACTGGCCTATGCCGGTCTGCACCAG
TTGTGCGGGCCCCTGATGGATTACCTCGACGACCTGCCGCCCCCGCAGCGCGATGCGCTCACCGTCGCGTTCGGGCGCGG
TGTCGGCCCACCTCCGGAGCGCTTTCTCGTCGGGTTGGCGGTGCTGAGCCTGGTCGCCGCCGCCGTGCACGAGCAACCCC
TGTTGTGCGTCGTCGACGACGCGCAGTGGCTGGATCAGGTGTCCGTGCAGACTCTGGGGTTCGTAGCCCGCCGGTTGATG
GCAGAACCGGTGGCGCTGGTGTTCGCGGCGCGTAACGAGGGTGCGGATGCACTGACGGGACTGCCCGAGTTGCCCGTTCG
TGGGCTCTCCGACGCCGATGCGCGGGAATTGTTGGAACGCGCAATGATCGGCGGCATCGATCCCAGTGTGAGGGACCGGG
TGGTGGCCGAAACTCGTGGCAACCCACTGGCATTGCTCGAAGTGCCGCGCAGCTACTCCTCGGCCGAACTGGCCGGTGGC
TTCTGGACTGTGGGTGCGATGACATCGCGGACCCGGATCGAGGAGAGCTTCGTCCAGCGCATCCAGGTGCTGCCGGACCG
GACCCGCCTGCTGCTGTTGCTCGCGGCCGCCGAACCGGTCGGCGACTCGTCGCTGTTCCTCCGTGCCGCCGCCATGCTGG
GCATCGCCGTGGACGCGTTGGCGCCGGCCGAGAGCGCGGGCGTCATCGAATTCGGCCCCCGTATGCGCTTTCACCACCCG
TTGATGCGCGCGGCGGCCTACCGCGCCGCCGACCTCGCCGACCGCCGCGCGGTCCACGCGGCACTGGCCGCGGCCACCGA
CGCCGAATCCGACCCCGACCGCCGGGCCTGGCACGCCGCCAACGCGGTGGCGGGCACCGACGACGCGGTCGCCGCCGAAC
TCGAGGCCTCGGCGAGCCGGGCCCAGAGTAGGGGCGGCATCGCAGCAGCAGCCGCGTTCATGGAGCGGGCCGCCGTGCTC
ACCGCCGATCCCGAGCTCCGCGGCAACCGAGCTCTGGCCGCCGCACAGGCGAAAAGGGACTCCGCGGCGACGGCGAAGGC
GTACGAACTGTTGACCATCGCCGAAACGGCTCCGCTGTCAGCACTCCAACGTGCCCGCGCCGCGCGTCTGCGTGCCCAGA
TGGCGTTCGTGCGCAGCCGGGTGGGGGAGAGTGGTGCCCCGGCCGTCGGGGACACCGCGCCGGCGTTACTGGATGCGGCG
AAACAGTTCGAGGGCCTCGATGACTTCGCCTCCCGCGAAAGCTATCTCGAGGCTTTCGCCGCGTTGATGTATGCCGGCCG
TCTCGCCCAGCCGGGCGCTCTCCTCCATACCGCCGAAGCGGCGCGATCGGCGACAGTGCGGATCTCGGAGCTGCCGCGGG
CCGTGGACCTGTTCTTCCGGGGGATCACCGATTGGATCATCGGGGGGATCCGCGGCGGCGAGTACCTGCGCGGCGCGCTG
GACACGATGCGCGCGTTGGCGTCCGACGACCCCGGCCAACTGCTGCGGTGGCTGGTGCCGGCCTTTCCGATCCTGCAGGA
AGCGGCCGCCCACGAACTGTGGGATGAAGACCTCGTCGACGCACTGTCTGCCGCCGTCGCCGGACAGGCACGTGAAGTCG
GCGCCTTGGCCGGCCTCCCGCAGGCGCTGGTGTACCGGGCCGGCGTCCACGTGCTGTTCGGCGAGTTCAACACGGCAGCG
ACGTTGATCGCCGAGGCGAACTCCATCACGGCGGCGACGACGCACAACGGGCCCGTCCGGTATCACTCCCTCTTGGTCGC
CGCGTGGCGGGGCGAGCCGGCGGAGGCCATGCGGCAGATCGATGCGGCCGCCGCTGACGGCGCAGCGCGCGGTGAGGGCC
GTGCGATCGGGCTGACCGGGTATGCGACCGCGGTGTTGTACAACGGGCTCGGCCGCTACGAGGAGGCGTTCACCGCTGCC
CGCCGGGCCTGTGAGTTCGAGGATCGGGGTTTCTACAGCTGGTGCCTGCACGAACTGGTGGAGGCCGCCGCACACCTCGG
CGAAACCGATGCCGCACGGCGAGCGGTCAGCCTCATCGAAGAGCGCGCCGGCGCCAGCGGCACCCCGTGGGGGCTCGGTG
CGTTGGCCAGTGCGCAGGCCATGTTGGCCGACAACGACGAGGCCGACCGGTTGTTCACCGAAGCGCTCGACCACCTGGGT
CGGTCTCGCGTGGCCGTGCACCGGGCCCGCACGCACCTCGGCTACGGCGAGTGGCTCAGGCGGATGAACCGGCGCGGTGA
TGCCCGCCGTCAGCTCAACGAGGCCCATGAGCTGTTCGTCCGGATGGGCGCACAGGCCTACGCCGAGCGGGCACGCAAGG
AGCTCATCGCCGTCGGTGAGAAGGTTCGCAAACAGCGGTTGACCTCGGGCGACGAACTGACCGCGCAGGAGGCGCAGATC
GCGCGGCTCGCGGCCGACGGGCTGACCAATCAGGAGATCGGTGCCCAGCTGTTCATCAGCGTGCACACCGTCGAATGGCA
TCTGCGCAAGGTCTTCGTGAAGGTGGGGATCACGTCGCGCAGGCAACTGCGCACCGTTGCGTGGTCTCACCAGGGGGTCA
CTACGGACCATTGA

Upstream 100 bases:

>100_bases
GCACCGTTGTCTGAGACGGTCACGTTCATCGCCGACAGCTAGACCCCTGACTCGTCCAATCGTTACCATCCACTCTGATC
GGTGGACGGTGTGGTGTCAT

Downstream 100 bases:

>100_bases
CCACGGATGACCAAGGGTCCTCTGGGGGCTCGGGGGCGCCAGTGTTGATCTCACAGCCCGATCGGGCTCGCAGAAATCAA
CCGGAGGTACTCCCATGAAG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: LuxR Family Transcriptional Regulator; Regulatory Protein LuxR; Transcriptional Regulator; ATPase-Like Protein; Transcriptional Regulatory Protein; Regulatory Protein; Transcriptional Activator; Transcription Regulator; Response Regulator Receiver Protein; Transcriptional Regulator Luxr Family; FAD Linked Oxidase Domain-Containing Protein; LAL Subfamily Transcriptional Regulator; LuxR Family ATP-Dependent Transcriptional Regulator; Luxr Family Transcriptional Regulator

Number of amino acids: Translated: 937; Mature: 936

Protein sequence:

>937_residues
MASQERGRLLYGRAVETAALRRVIAAVRTGRSQVLVLRGEPGAGKTALLGYLLDEAPGWRCVHVAGVESDMELAYAGLHQ
LCGPLMDYLDDLPPPQRDALTVAFGRGVGPPPERFLVGLAVLSLVAAAVHEQPLLCVVDDAQWLDQVSVQTLGFVARRLM
AEPVALVFAARNEGADALTGLPELPVRGLSDADARELLERAMIGGIDPSVRDRVVAETRGNPLALLEVPRSYSSAELAGG
FWTVGAMTSRTRIEESFVQRIQVLPDRTRLLLLLAAAEPVGDSSLFLRAAAMLGIAVDALAPAESAGVIEFGPRMRFHHP
LMRAAAYRAADLADRRAVHAALAAATDAESDPDRRAWHAANAVAGTDDAVAAELEASASRAQSRGGIAAAAAFMERAAVL
TADPELRGNRALAAAQAKRDSAATAKAYELLTIAETAPLSALQRARAARLRAQMAFVRSRVGESGAPAVGDTAPALLDAA
KQFEGLDDFASRESYLEAFAALMYAGRLAQPGALLHTAEAARSATVRISELPRAVDLFFRGITDWIIGGIRGGEYLRGAL
DTMRALASDDPGQLLRWLVPAFPILQEAAAHELWDEDLVDALSAAVAGQAREVGALAGLPQALVYRAGVHVLFGEFNTAA
TLIAEANSITAATTHNGPVRYHSLLVAAWRGEPAEAMRQIDAAAADGAARGEGRAIGLTGYATAVLYNGLGRYEEAFTAA
RRACEFEDRGFYSWCLHELVEAAAHLGETDAARRAVSLIEERAGASGTPWGLGALASAQAMLADNDEADRLFTEALDHLG
RSRVAVHRARTHLGYGEWLRRMNRRGDARRQLNEAHELFVRMGAQAYAERARKELIAVGEKVRKQRLTSGDELTAQEAQI
ARLAADGLTNQEIGAQLFISVHTVEWHLRKVFVKVGITSRRQLRTVAWSHQGVTTDH

Sequences:

>Translated_937_residues
MASQERGRLLYGRAVETAALRRVIAAVRTGRSQVLVLRGEPGAGKTALLGYLLDEAPGWRCVHVAGVESDMELAYAGLHQ
LCGPLMDYLDDLPPPQRDALTVAFGRGVGPPPERFLVGLAVLSLVAAAVHEQPLLCVVDDAQWLDQVSVQTLGFVARRLM
AEPVALVFAARNEGADALTGLPELPVRGLSDADARELLERAMIGGIDPSVRDRVVAETRGNPLALLEVPRSYSSAELAGG
FWTVGAMTSRTRIEESFVQRIQVLPDRTRLLLLLAAAEPVGDSSLFLRAAAMLGIAVDALAPAESAGVIEFGPRMRFHHP
LMRAAAYRAADLADRRAVHAALAAATDAESDPDRRAWHAANAVAGTDDAVAAELEASASRAQSRGGIAAAAAFMERAAVL
TADPELRGNRALAAAQAKRDSAATAKAYELLTIAETAPLSALQRARAARLRAQMAFVRSRVGESGAPAVGDTAPALLDAA
KQFEGLDDFASRESYLEAFAALMYAGRLAQPGALLHTAEAARSATVRISELPRAVDLFFRGITDWIIGGIRGGEYLRGAL
DTMRALASDDPGQLLRWLVPAFPILQEAAAHELWDEDLVDALSAAVAGQAREVGALAGLPQALVYRAGVHVLFGEFNTAA
TLIAEANSITAATTHNGPVRYHSLLVAAWRGEPAEAMRQIDAAAADGAARGEGRAIGLTGYATAVLYNGLGRYEEAFTAA
RRACEFEDRGFYSWCLHELVEAAAHLGETDAARRAVSLIEERAGASGTPWGLGALASAQAMLADNDEADRLFTEALDHLG
RSRVAVHRARTHLGYGEWLRRMNRRGDARRQLNEAHELFVRMGAQAYAERARKELIAVGEKVRKQRLTSGDELTAQEAQI
ARLAADGLTNQEIGAQLFISVHTVEWHLRKVFVKVGITSRRQLRTVAWSHQGVTTDH
>Mature_936_residues
ASQERGRLLYGRAVETAALRRVIAAVRTGRSQVLVLRGEPGAGKTALLGYLLDEAPGWRCVHVAGVESDMELAYAGLHQL
CGPLMDYLDDLPPPQRDALTVAFGRGVGPPPERFLVGLAVLSLVAAAVHEQPLLCVVDDAQWLDQVSVQTLGFVARRLMA
EPVALVFAARNEGADALTGLPELPVRGLSDADARELLERAMIGGIDPSVRDRVVAETRGNPLALLEVPRSYSSAELAGGF
WTVGAMTSRTRIEESFVQRIQVLPDRTRLLLLLAAAEPVGDSSLFLRAAAMLGIAVDALAPAESAGVIEFGPRMRFHHPL
MRAAAYRAADLADRRAVHAALAAATDAESDPDRRAWHAANAVAGTDDAVAAELEASASRAQSRGGIAAAAAFMERAAVLT
ADPELRGNRALAAAQAKRDSAATAKAYELLTIAETAPLSALQRARAARLRAQMAFVRSRVGESGAPAVGDTAPALLDAAK
QFEGLDDFASRESYLEAFAALMYAGRLAQPGALLHTAEAARSATVRISELPRAVDLFFRGITDWIIGGIRGGEYLRGALD
TMRALASDDPGQLLRWLVPAFPILQEAAAHELWDEDLVDALSAAVAGQAREVGALAGLPQALVYRAGVHVLFGEFNTAAT
LIAEANSITAATTHNGPVRYHSLLVAAWRGEPAEAMRQIDAAAADGAARGEGRAIGLTGYATAVLYNGLGRYEEAFTAAR
RACEFEDRGFYSWCLHELVEAAAHLGETDAARRAVSLIEERAGASGTPWGLGALASAQAMLADNDEADRLFTEALDHLGR
SRVAVHRARTHLGYGEWLRRMNRRGDARRQLNEAHELFVRMGAQAYAERARKELIAVGEKVRKQRLTSGDELTAQEAQIA
RLAADGLTNQEIGAQLFISVHTVEWHLRKVFVKVGITSRRQLRTVAWSHQGVTTDH

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100312; Mature: 100181

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS50043 HTH_LUXR_2 ; PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQERGRLLYGRAVETAALRRVIAAVRTGRSQVLVLRGEPGAGKTALLGYLLDEAPGWR
CCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCE
CVHVAGVESDMELAYAGLHQLCGPLMDYLDDLPPPQRDALTVAFGRGVGPPPERFLVGLA
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
VLSLVAAAVHEQPLLCVVDDAQWLDQVSVQTLGFVARRLMAEPVALVFAARNEGADALTG
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHCC
LPELPVRGLSDADARELLERAMIGGIDPSVRDRVVAETRGNPLALLEVPRSYSSAELAGG
CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCC
FWTVGAMTSRTRIEESFVQRIQVLPDRTRLLLLLAAAEPVGDSSLFLRAAAMLGIAVDAL
EEECCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHC
APAESAGVIEFGPRMRFHHPLMRAAAYRAADLADRRAVHAALAAATDAESDPDRRAWHAA
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
NAVAGTDDAVAAELEASASRAQSRGGIAAAAAFMERAAVLTADPELRGNRALAAAQAKRD
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHC
SAATAKAYELLTIAETAPLSALQRARAARLRAQMAFVRSRVGESGAPAVGDTAPALLDAA
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
KQFEGLDDFASRESYLEAFAALMYAGRLAQPGALLHTAEAARSATVRISELPRAVDLFFR
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEHHHCHHHHHHHHH
GITDWIIGGIRGGEYLRGALDTMRALASDDPGQLLRWLVPAFPILQEAAAHELWDEDLVD
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSAAVAGQAREVGALAGLPQALVYRAGVHVLFGEFNTAATLIAEANSITAATTHNGPVR
HHHHHHHCCHHHHHHHHCCHHHHHHHHCHHEEEECCCHHHHHHEECCCEEEEECCCCCHH
YHSLLVAAWRGEPAEAMRQIDAAAADGAARGEGRAIGLTGYATAVLYNGLGRYEEAFTAA
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
RRACEFEDRGFYSWCLHELVEAAAHLGETDAARRAVSLIEERAGASGTPWGLGALASAQA
HHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MLADNDEADRLFTEALDHLGRSRVAVHRARTHLGYGEWLRRMNRRGDARRQLNEAHELFV
HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH
RMGAQAYAERARKELIAVGEKVRKQRLTSGDELTAQEAQIARLAADGLTNQEIGAQLFIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEE
VHTVEWHLRKVFVKVGITSRRQLRTVAWSHQGVTTDH
EEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ASQERGRLLYGRAVETAALRRVIAAVRTGRSQVLVLRGEPGAGKTALLGYLLDEAPGWR
CCCCCCCEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCE
CVHVAGVESDMELAYAGLHQLCGPLMDYLDDLPPPQRDALTVAFGRGVGPPPERFLVGLA
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
VLSLVAAAVHEQPLLCVVDDAQWLDQVSVQTLGFVARRLMAEPVALVFAARNEGADALTG
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHCC
LPELPVRGLSDADARELLERAMIGGIDPSVRDRVVAETRGNPLALLEVPRSYSSAELAGG
CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCC
FWTVGAMTSRTRIEESFVQRIQVLPDRTRLLLLLAAAEPVGDSSLFLRAAAMLGIAVDAL
EEECCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHC
APAESAGVIEFGPRMRFHHPLMRAAAYRAADLADRRAVHAALAAATDAESDPDRRAWHAA
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
NAVAGTDDAVAAELEASASRAQSRGGIAAAAAFMERAAVLTADPELRGNRALAAAQAKRD
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHC
SAATAKAYELLTIAETAPLSALQRARAARLRAQMAFVRSRVGESGAPAVGDTAPALLDAA
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
KQFEGLDDFASRESYLEAFAALMYAGRLAQPGALLHTAEAARSATVRISELPRAVDLFFR
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEHHHCHHHHHHHHH
GITDWIIGGIRGGEYLRGALDTMRALASDDPGQLLRWLVPAFPILQEAAAHELWDEDLVD
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSAAVAGQAREVGALAGLPQALVYRAGVHVLFGEFNTAATLIAEANSITAATTHNGPVR
HHHHHHHCCHHHHHHHHCCHHHHHHHHCHHEEEECCCHHHHHHEECCCEEEEECCCCCHH
YHSLLVAAWRGEPAEAMRQIDAAAADGAARGEGRAIGLTGYATAVLYNGLGRYEEAFTAA
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
RRACEFEDRGFYSWCLHELVEAAAHLGETDAARRAVSLIEERAGASGTPWGLGALASAQA
HHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MLADNDEADRLFTEALDHLGRSRVAVHRARTHLGYGEWLRRMNRRGDARRQLNEAHELFV
HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH
RMGAQAYAERARKELIAVGEKVRKQRLTSGDELTAQEAQIARLAADGLTNQEIGAQLFIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEE
VHTVEWHLRKVFVKVGITSRRQLRTVAWSHQGVTTDH
EEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA