| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108801806
Identifier: 108801806
GI number: 108801806
Start: 5130393
End: 5130872
Strand: Reverse
Name: 108801806
Synonym: Mmcs_4843
Alternate gene names: NA
Gene position: 5130872-5130393 (Counterclockwise)
Preceding gene: 108801807
Following gene: 108801800
Centisome position: 89.93
GC content: 57.71
Gene sequence:
>480_bases GTGCTTGACGAATCCATGAATCTCGGCGTAATTCAGCGCCGACCTGTTCGGCGTGTCGCCGCAGGGCGTCGACCGCAACC AGTACGACCGCATTCGGGGTCAGAAGCGGCTGGTCCATGCGCTCAAAGTTACTACGCGTTACGCGTCACGCGTAGTTATT GCTGCAGTTACGATCTAACCGTGTCACTGGCTGAAAGCAACGAATTGCGGCAGTTGTCGCGCGTGTTGTTCGGCCAGGCC CATCGTCTGTCGGTGATGGTGGGAATTGCCCGCGGCGGGAAAGAATTCGCCCTCTCCGAGCTCGCTGACGAACTGGGATT TGAGTATCTGAGCAGCATTCAAGACCCGATCAGGGATCTTGAAGCCTCGGAGTTGATCTCGCGGATACCAAAGGTAGCCA ACAAGGTTCGCTTCCGCAAGAACAAGAGCTACGCCTGGAAGTGGGCTGAGGAGCTCGCGTCCCGGTACCCCGAGCAATGA
Upstream 100 bases:
>100_bases TCGGCGGCTGATTCGGTTACCCCGCGACTGTCAGGCTTTAACCGGCGTAACGCCCGTTGAGCAAGGCCGGAGGGAAGCGC CTGCAGCACTTCCTCGATGA
Downstream 100 bases:
>100_bases TTGGCCGGATCAATGATTTCGATGCCGCGGTGATGTTTAGTTGCGGTTCGATCGAGTTCGCGTGAGTGCCCACCTAATCC CCCGAGCCGTCTTTTCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MLDESMNLGVIQRRPVRRVAAGRRPQPVRPHSGSEAAGPCAQSYYALRVTRSYCCSYDLTVSLAESNELRQLSRVLFGQA HRLSVMVGIARGGKEFALSELADELGFEYLSSIQDPIRDLEASELISRIPKVANKVRFRKNKSYAWKWAEELASRYPEQ
Sequences:
>Translated_159_residues MLDESMNLGVIQRRPVRRVAAGRRPQPVRPHSGSEAAGPCAQSYYALRVTRSYCCSYDLTVSLAESNELRQLSRVLFGQA HRLSVMVGIARGGKEFALSELADELGFEYLSSIQDPIRDLEASELISRIPKVANKVRFRKNKSYAWKWAEELASRYPEQ >Mature_159_residues MLDESMNLGVIQRRPVRRVAAGRRPQPVRPHSGSEAAGPCAQSYYALRVTRSYCCSYDLTVSLAESNELRQLSRVLFGQA HRLSVMVGIARGGKEFALSELADELGFEYLSSIQDPIRDLEASELISRIPKVANKVRFRKNKSYAWKWAEELASRYPEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17977; Mature: 17977
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDESMNLGVIQRRPVRRVAAGRRPQPVRPHSGSEAAGPCAQSYYALRVTRSYCCSYDLT CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE VSLAESNELRQLSRVLFGQAHRLSVMVGIARGGKEFALSELADELGFEYLSSIQDPIRDL EEECCCHHHHHHHHHHHCCHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC EASELISRIPKVANKVRFRKNKSYAWKWAEELASRYPEQ CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MLDESMNLGVIQRRPVRRVAAGRRPQPVRPHSGSEAAGPCAQSYYALRVTRSYCCSYDLT CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE VSLAESNELRQLSRVLFGQAHRLSVMVGIARGGKEFALSELADELGFEYLSSIQDPIRDL EEECCCHHHHHHHHHHHCCHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC EASELISRIPKVANKVRFRKNKSYAWKWAEELASRYPEQ CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA