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The map label for this gene is 108801800

Identifier: 108801800

GI number: 108801800

Start: 5121699

End: 5122412

Strand: Reverse

Name: 108801800

Synonym: Mmcs_4837

Alternate gene names: NA

Gene position: 5122412-5121699 (Counterclockwise)

Preceding gene: 108801806

Following gene: 108801799

Centisome position: 89.78

GC content: 64.43

Gene sequence:

>714_bases
GTGAGCGACAGCAGTCAGCCATCCCTGCACGATGACGACGACATCGACCCGCGGCGGATACGGTCACGCAACCGGTTATT
GGACGCTGCCGCAACACTTCTGAGCACCGGAGGCGTCGAGGCCGTCACCATCGATGCCGTCACCAAAGCATCCAAGGTTG
CCCGCACCACCCTCTATCGGCATTTTCAGAGCTCGTCGCATCTGCTTGCCGCCACGTTCGAGCGGCTACTGCCGCAGGTG
ACCACACCGGCACCCACCAGCGGTTCCCTGCGTGATCAACTGATTGAGCTGCTCAGCCGCCAAGCCGCCCTGTTCAACGA
CGCCCCGCTGCACGTCACCACCCTGGCATGGCTCTCACTCGGGCCGACCGGCGCCAAAGACGAGACCGACGATCGCCACG
CATCCGGGGCTCTGCGGGCCCGAGTCGTCGACCAGTACCGACAACCGTTCGACGCGCTACTCAACGGCGATAAAGCTCGA
GCCGAACTCGACGACTTCGACCTTGAATTGGCGCTGTGCCAACTCGTCGGCCCGCTGGCCTTCGCACGCATGACCGGGAT
TCGCACCGTAACCCACAAGGACTGCGCGAACATCGTCGACGATTTCCTCGCCGCCCACCGCAAAATCGTGGAAGACGGCG
GCGACCGGGTGAAGCCCAGGAGCACGCGGCGGTCGGACGGGGCGCGCCGTCCGTCTAGACAGATAGTCACCTGA

Upstream 100 bases:

>100_bases
ACACTCCCGGTACATCTAGTTTCGCTGCGATACTCTTGGTACCACAACTGCTAGACTGTCGTGCGCGACATCGCCTGAAA
TCGACCGCCGAGGTGACCCC

Downstream 100 bases:

>100_bases
TACCGGCACGGGGCGGCTCTGTCGGCAACCGCAGCGACCCTGAATGCACACGGCGGAGCTGTTTAACCCAACTCCGATCG
CAGGCAAGAAGTACGTTCGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSDSSQPSLHDDDDIDPRRIRSRNRLLDAAATLLSTGGVEAVTIDAVTKASKVARTTLYRHFQSSSHLLAATFERLLPQV
TTPAPTSGSLRDQLIELLSRQAALFNDAPLHVTTLAWLSLGPTGAKDETDDRHASGALRARVVDQYRQPFDALLNGDKAR
AELDDFDLELALCQLVGPLAFARMTGIRTVTHKDCANIVDDFLAAHRKIVEDGGDRVKPRSTRRSDGARRPSRQIVT

Sequences:

>Translated_237_residues
MSDSSQPSLHDDDDIDPRRIRSRNRLLDAAATLLSTGGVEAVTIDAVTKASKVARTTLYRHFQSSSHLLAATFERLLPQV
TTPAPTSGSLRDQLIELLSRQAALFNDAPLHVTTLAWLSLGPTGAKDETDDRHASGALRARVVDQYRQPFDALLNGDKAR
AELDDFDLELALCQLVGPLAFARMTGIRTVTHKDCANIVDDFLAAHRKIVEDGGDRVKPRSTRRSDGARRPSRQIVT
>Mature_236_residues
SDSSQPSLHDDDDIDPRRIRSRNRLLDAAATLLSTGGVEAVTIDAVTKASKVARTTLYRHFQSSSHLLAATFERLLPQVT
TPAPTSGSLRDQLIELLSRQAALFNDAPLHVTTLAWLSLGPTGAKDETDDRHASGALRARVVDQYRQPFDALLNGDKARA
ELDDFDLELALCQLVGPLAFARMTGIRTVTHKDCANIVDDFLAAHRKIVEDGGDRVKPRSTRRSDGARRPSRQIVT

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25989; Mature: 25857

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSSQPSLHDDDDIDPRRIRSRNRLLDAAATLLSTGGVEAVTIDAVTKASKVARTTLYR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
HFQSSSHLLAATFERLLPQVTTPAPTSGSLRDQLIELLSRQAALFNDAPLHVTTLAWLSL
HHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GPTGAKDETDDRHASGALRARVVDQYRQPFDALLNGDKARAELDDFDLELALCQLVGPLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
FARMTGIRTVTHKDCANIVDDFLAAHRKIVEDGGDRVKPRSTRRSDGARRPSRQIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDSSQPSLHDDDDIDPRRIRSRNRLLDAAATLLSTGGVEAVTIDAVTKASKVARTTLYR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
HFQSSSHLLAATFERLLPQVTTPAPTSGSLRDQLIELLSRQAALFNDAPLHVTTLAWLSL
HHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GPTGAKDETDDRHASGALRARVVDQYRQPFDALLNGDKARAELDDFDLELALCQLVGPLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
FARMTGIRTVTHKDCANIVDDFLAAHRKIVEDGGDRVKPRSTRRSDGARRPSRQIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA