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The map label for this gene is nudL [H]

Identifier: 108801777

GI number: 108801777

Start: 5098966

End: 5099745

Strand: Reverse

Name: nudL [H]

Synonym: Mmcs_4814

Alternate gene names: 108801777

Gene position: 5099745-5098966 (Counterclockwise)

Preceding gene: 108801778

Following gene: 108801776

Centisome position: 89.38

GC content: 71.03

Gene sequence:

>780_bases
GTGAGCGCGACGCGCGACGGGCACCGCTTGATTCCCGACGCCGCGCCCGCCTGGCTCAAACCGCTGGTCCACAACACCGA
CAGCGTGCCCCGCGCCTACCGCCGCCGGGTGCCGCCGGACGTGCTGGCCGCGATCACCGCGGCGAACGCCACCGCGACGG
TCACCCGCGCGAAACGTGACGCCGCGGTGTTGGTGCTGTTCTCCGGTCCGGAGAAATCCGGCGAGGGGCTACCCCACGAT
GCCGACCTGCTCGTGACGGTGCGGGCGTCGACCCTGCGCCACCACGCCGGTCAGGCGGCCTTCCCCGGGGGCGCGACGGA
CCCCGACGACGAGGGTCCCGTGCACACCGCGCTGCGCGAGGCCACCGAGGAGACCGGCCTCGACACCAGTCGCCTGCAGC
CGCTGGCGACGTTGCAGCGGATGTTCATCCCGCCGTCGGGTTTCCACGTCGTGCCAGTGCTGGCCTATTCGCCCGACCCG
GGCCCGGTGGCCGTCGTCGACGAATCCGAGACCGCGATCGTGGCGCGGGTGCCCGTGCGCGCCTTCGTCAACCCGGAGAA
CCGGTTGATGGTCTACCGCGACGCCAAGTCGCGCAGGTGGGCCGGCCCCGCATTCCTGCTCAACGAGATGCTGGTGTGGG
GCTTCACCGGTCAGGTCATCTCCGCGATCCTCGACGTCGCCGGGTGGGCCGTGCCCTGGAACACCGACGACGTTCGGGAA
CTCGACGAGGCAATGGCGCTCGTCGGGGACGACGACCGTTACGGTGAGTCTCAACAATGA

Upstream 100 bases:

>100_bases
TGCTGCGTGCGGACGGTAGCGTGGCCGGAATTGTGCCGCGGTCCTTCGCCACCGCCGACGAGATCGAGGAAGCGGTGGAC
CAGACGATGGGAGAGTCGGG

Downstream 100 bases:

>100_bases
CACCGTCTCAGTGGCTCGACTTCCTCGTCCTCGCCGTTGCCTTCGTCGCCGCCGTCTCGGGCTGGCGCTCAGGCGCGTTG
GGGTCCCTCATGTCGTTCAT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSATRDGHRLIPDAAPAWLKPLVHNTDSVPRAYRRRVPPDVLAAITAANATATVTRAKRDAAVLVLFSGPEKSGEGLPHD
ADLLVTVRASTLRHHAGQAAFPGGATDPDDEGPVHTALREATEETGLDTSRLQPLATLQRMFIPPSGFHVVPVLAYSPDP
GPVAVVDESETAIVARVPVRAFVNPENRLMVYRDAKSRRWAGPAFLLNEMLVWGFTGQVISAILDVAGWAVPWNTDDVRE
LDEAMALVGDDDRYGESQQ

Sequences:

>Translated_259_residues
MSATRDGHRLIPDAAPAWLKPLVHNTDSVPRAYRRRVPPDVLAAITAANATATVTRAKRDAAVLVLFSGPEKSGEGLPHD
ADLLVTVRASTLRHHAGQAAFPGGATDPDDEGPVHTALREATEETGLDTSRLQPLATLQRMFIPPSGFHVVPVLAYSPDP
GPVAVVDESETAIVARVPVRAFVNPENRLMVYRDAKSRRWAGPAFLLNEMLVWGFTGQVISAILDVAGWAVPWNTDDVRE
LDEAMALVGDDDRYGESQQ
>Mature_258_residues
SATRDGHRLIPDAAPAWLKPLVHNTDSVPRAYRRRVPPDVLAAITAANATATVTRAKRDAAVLVLFSGPEKSGEGLPHDA
DLLVTVRASTLRHHAGQAAFPGGATDPDDEGPVHTALREATEETGLDTSRLQPLATLQRMFIPPSGFHVVPVLAYSPDPG
PVAVVDESETAIVARVPVRAFVNPENRLMVYRDAKSRRWAGPAFLLNEMLVWGFTGQVISAILDVAGWAVPWNTDDVREL
DEAMALVGDDDRYGESQQ

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Drosophila melanogaster, GI18859683, Length=187, Percent_Identity=28.8770053475936, Blast_Score=71, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 27977; Mature: 27846

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATRDGHRLIPDAAPAWLKPLVHNTDSVPRAYRRRVPPDVLAAITAANATATVTRAKRD
CCCCCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCC
AAVLVLFSGPEKSGEGLPHDADLLVTVRASTLRHHAGQAAFPGGATDPDDEGPVHTALRE
EEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
ATEETGLDTSRLQPLATLQRMFIPPSGFHVVPVLAYSPDPGPVAVVDESETAIVARVPVR
HHHHHCCCHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCEEEEECCEE
AFVNPENRLMVYRDAKSRRWAGPAFLLNEMLVWGFTGQVISAILDVAGWAVPWNTDDVRE
EEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH
LDEAMALVGDDDRYGESQQ
HHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SATRDGHRLIPDAAPAWLKPLVHNTDSVPRAYRRRVPPDVLAAITAANATATVTRAKRD
CCCCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCC
AAVLVLFSGPEKSGEGLPHDADLLVTVRASTLRHHAGQAAFPGGATDPDDEGPVHTALRE
EEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
ATEETGLDTSRLQPLATLQRMFIPPSGFHVVPVLAYSPDPGPVAVVDESETAIVARVPVR
HHHHHCCCHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCEEEEECCEE
AFVNPENRLMVYRDAKSRRWAGPAFLLNEMLVWGFTGQVISAILDVAGWAVPWNTDDVRE
EEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH
LDEAMALVGDDDRYGESQQ
HHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA