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The map label for this gene is degQ [C]

Identifier: 108801776

GI number: 108801776

Start: 5097782

End: 5098969

Strand: Reverse

Name: degQ [C]

Synonym: Mmcs_4813

Alternate gene names: 108801776

Gene position: 5098969-5097782 (Counterclockwise)

Preceding gene: 108801777

Following gene: 108801773

Centisome position: 89.37

GC content: 70.12

Gene sequence:

>1188_bases
ATGACACCGTCTCAGTGGCTCGACTTCCTCGTCCTCGCCGTTGCCTTCGTCGCCGCCGTCTCGGGCTGGCGCTCAGGCGC
GTTGGGGTCCCTCATGTCGTTCATCGGCGTGGTGCTCGGCGCGGTCGCCGGCGTGCTGCTCGCCCCGCACGTGGTCACCC
ACATCAGCGGTCCCCGCACCAAACTGTTCGCGGCGCTGTTCCTGATCCTCGCGCTGGTGGTGATCGGCGAGATCGCCGGC
GTGGTCCTGGGCCGTGCCGTGCGCGGTGCGATCCGCAACCGCACGCTGCGCCTGTTCGACTCCGTGGTCGGGGTGGGCCT
GCAGATCGGGGCGGTGCTGCTCGCGTCCTGGCTGCTGGCGACCCCGCTGACGTCCTCGGACCAGCCGAGCCTGGCCGCGG
CCGTCAAGGGCTCACGGGTGCTGGCCGAGGTGGACGACGTCGCACCGCCGTGGCTGAAGTCGGTGCCCACACGGCTCTCC
GGTCTTCTCGACACCTCGGGCCTACCCGAAGTCCTCGAACCGTTCGGCCGCACCCCGATCGCGACGGTCGACGCCCCGGA
CGCGGCGCTGGCCACCGATGCCGTGGTCGGGGCGACACGTGGCAGCGTGGTGAAGATCCGCGGTGTCGCGCCCGGCTGCC
AGAAGGTGCTCGAGGGCACCGGTTTCGTGGTGTCGCCGAACCGGGTGATGTCCAACGCCCACGTCGTCGCCGGCTCGGAG
AGCGTCACCGTGGAGGTCGACGGTCAGACCTACGACGCCTTCGTGGTGTCCTACGACCCGAACGCCGACATCTCGATCCT
CGACGTCCCGGACCTGCCCGCGGCGCCGCTGCCGTTCGTCGACGAGTTGGCGCCCCCGGGGACCGACGCCATCGTGATGG
GCTATCCCGGCGGCGGCGACTTCACCGCCACCCCGGCGCGGATCCGCGAGACCATCGAGCTCAACGGGCCCGACATCTAT
CGCAAGACCACGGTCACCCGCGAGGTCTACACCATCAGAGGGACTGTGCGTCAGGGCAATTCAGGTGGTCCGATGATCAA
CCGCGGCGGCAAGGTGCTGGGTGTGGTGTTCGGCGCCGCAGTCGACGACGCCGACACCGGGTTCGTGCTGACCTCCGACG
AGGTGGGGGCTCAGCTGGCCAAGGTGGGTAACACCGCACGGGTGCCCACCGGCGTCTGCGTGAGCTGA

Upstream 100 bases:

>100_bases
TCGCCGGGTGGGCCGTGCCCTGGAACACCGACGACGTTCGGGAACTCGACGAGGCAATGGCGCTCGTCGGGGACGACGAC
CGTTACGGTGAGTCTCAACA

Downstream 100 bases:

>100_bases
TCTAGCCGCCGTACACGTGGCCGAGGAACCGGCCGAGGTGCTCGTTGGCCTCCTCGGGGGCTTCCTCGTGACCGTAATGG
CCTGCGTCGCTGAGCGATAC

Product: colicin V production protein

Products: NA

Alternate protein names: Colicin V Production Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Membrane-Associated Serine Protease; Trypsin-Like Serine Protease; Protease; Peptidase; Serine Peptidase; Serine Proteinase; Trypsin-Like Serine Protease With C-Terminal PDZ Domain; S1C Family Peptidase

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MTPSQWLDFLVLAVAFVAAVSGWRSGALGSLMSFIGVVLGAVAGVLLAPHVVTHISGPRTKLFAALFLILALVVIGEIAG
VVLGRAVRGAIRNRTLRLFDSVVGVGLQIGAVLLASWLLATPLTSSDQPSLAAAVKGSRVLAEVDDVAPPWLKSVPTRLS
GLLDTSGLPEVLEPFGRTPIATVDAPDAALATDAVVGATRGSVVKIRGVAPGCQKVLEGTGFVVSPNRVMSNAHVVAGSE
SVTVEVDGQTYDAFVVSYDPNADISILDVPDLPAAPLPFVDELAPPGTDAIVMGYPGGGDFTATPARIRETIELNGPDIY
RKTTVTREVYTIRGTVRQGNSGGPMINRGGKVLGVVFGAAVDDADTGFVLTSDEVGAQLAKVGNTARVPTGVCVS

Sequences:

>Translated_395_residues
MTPSQWLDFLVLAVAFVAAVSGWRSGALGSLMSFIGVVLGAVAGVLLAPHVVTHISGPRTKLFAALFLILALVVIGEIAG
VVLGRAVRGAIRNRTLRLFDSVVGVGLQIGAVLLASWLLATPLTSSDQPSLAAAVKGSRVLAEVDDVAPPWLKSVPTRLS
GLLDTSGLPEVLEPFGRTPIATVDAPDAALATDAVVGATRGSVVKIRGVAPGCQKVLEGTGFVVSPNRVMSNAHVVAGSE
SVTVEVDGQTYDAFVVSYDPNADISILDVPDLPAAPLPFVDELAPPGTDAIVMGYPGGGDFTATPARIRETIELNGPDIY
RKTTVTREVYTIRGTVRQGNSGGPMINRGGKVLGVVFGAAVDDADTGFVLTSDEVGAQLAKVGNTARVPTGVCVS
>Mature_394_residues
TPSQWLDFLVLAVAFVAAVSGWRSGALGSLMSFIGVVLGAVAGVLLAPHVVTHISGPRTKLFAALFLILALVVIGEIAGV
VLGRAVRGAIRNRTLRLFDSVVGVGLQIGAVLLASWLLATPLTSSDQPSLAAAVKGSRVLAEVDDVAPPWLKSVPTRLSG
LLDTSGLPEVLEPFGRTPIATVDAPDAALATDAVVGATRGSVVKIRGVAPGCQKVLEGTGFVVSPNRVMSNAHVVAGSES
VTVEVDGQTYDAFVVSYDPNADISILDVPDLPAAPLPFVDELAPPGTDAIVMGYPGGGDFTATPARIRETIELNGPDIYR
KTTVTREVYTIRGTVRQGNSGGPMINRGGKVLGVVFGAAVDDADTGFVLTSDEVGAQLAKVGNTARVPTGVCVS

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 40590; Mature: 40459

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSQWLDFLVLAVAFVAAVSGWRSGALGSLMSFIGVVLGAVAGVLLAPHVVTHISGPRT
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLFAALFLILALVVIGEIAGVVLGRAVRGAIRNRTLRLFDSVVGVGLQIGAVLLASWLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLTSSDQPSLAAAVKGSRVLAEVDDVAPPWLKSVPTRLSGLLDTSGLPEVLEPFGRTPI
CCCCCCCCCCHHHHHCCCHHEEHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCE
ATVDAPDAALATDAVVGATRGSVVKIRGVAPGCQKVLEGTGFVVSPNRVMSNAHVVAGSE
EEECCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCEEECCHHHHCCCEEEECCC
SVTVEVDGQTYDAFVVSYDPNADISILDVPDLPAAPLPFVDELAPPGTDAIVMGYPGGGD
EEEEEECCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHCCCCCCCEEEEECCCCCC
FTATPARIRETIELNGPDIYRKTTVTREVYTIRGTVRQGNSGGPMINRGGKVLGVVFGAA
CCCCHHHHHHEEECCCCCCEEHHHHHEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECE
VDDADTGFVLTSDEVGAQLAKVGNTARVPTGVCVS
ECCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPSQWLDFLVLAVAFVAAVSGWRSGALGSLMSFIGVVLGAVAGVLLAPHVVTHISGPRT
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLFAALFLILALVVIGEIAGVVLGRAVRGAIRNRTLRLFDSVVGVGLQIGAVLLASWLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLTSSDQPSLAAAVKGSRVLAEVDDVAPPWLKSVPTRLSGLLDTSGLPEVLEPFGRTPI
CCCCCCCCCCHHHHHCCCHHEEHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCE
ATVDAPDAALATDAVVGATRGSVVKIRGVAPGCQKVLEGTGFVVSPNRVMSNAHVVAGSE
EEECCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCEEECCHHHHCCCEEEECCC
SVTVEVDGQTYDAFVVSYDPNADISILDVPDLPAAPLPFVDELAPPGTDAIVMGYPGGGD
EEEEEECCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHCCCCCCCEEEEECCCCCC
FTATPARIRETIELNGPDIYRKTTVTREVYTIRGTVRQGNSGGPMINRGGKVLGVVFGAA
CCCCHHHHHHEEECCCCCCEEHHHHHEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECE
VDDADTGFVLTSDEVGAQLAKVGNTARVPTGVCVS
ECCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA