| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108801771
Identifier: 108801771
GI number: 108801771
Start: 5092636
End: 5093376
Strand: Reverse
Name: 108801771
Synonym: Mmcs_4808
Alternate gene names: NA
Gene position: 5093376-5092636 (Counterclockwise)
Preceding gene: 108801773
Following gene: 108801769
Centisome position: 89.27
GC content: 73.14
Gene sequence:
>741_bases ATGACCGATCCGCTGGCCCCCCTCGTCGAGCTTCCCGGAGTGGCCGAGGCCAGTGAGGAGGCCCGCAACGCACTGGGGCG GGCACATCGGCACAAGACCAATCTGCGGGGCTGGCCTGCCACGGCCGCCGAGGCGGCTTTGCGGGCGGCGCGGGCGTCGT CGGTGCTCGACGGCGGATCCCTGCAACTGGCGGACACCGGTGAAGCCGATCCCGTGCTGGCCGGTGCGTTGCGGGTGTCG CAGGCCCTCGAGGGTGGTGCGACCGCGCTGGTCGACGTGTGGCAGCGCGCTCCGCTGCAGGCGCTCGCCCGGCTGCATTC GCTGGCGGCCGCCGACCTCACCGACGACGAACACCTCGGTCGGCCCCGTGCGGACGCCGGCGTCGGCAAGCGGCTGGAAC TGCTGGTCGAGATCCTCACCGGCGGCTCGCAGGCACCGGCCCCGGTGCTCGCCGCCGTCGCGCACGGTGAATTGCTGACG CTGGCGCCGTTCGGGACGGCCGACGGTGTGGTGGCCAGGGGGGTGTCGCGGTTGGTGACGATCACCAGCGGGCTGGACCC GCACGGCCTCGGCGTTCCGGAGGTGTACTGGATGCGCCAGTCCGGGGACTATCAGGCCGCCGCCCGCGGCTTCGCGTCCG GAACACCGGACGGTCTCACGGCGTGGTTGCTGCTGAGTTGCCGGGCGCTGCACGAGGGGGCTCGCGAGGCCCTGCAGATC GCCTCGACATCCGCGAGCTGA
Upstream 100 bases:
>100_bases AACTCCACACCGAGACATCACATCGCCGCCTGTAGACGGCCGATGTCATGCGGCGAGCGTCGGGAATCCGAGGCCCAGCG GTCGACTACCGTGGGCTGCC
Downstream 100 bases:
>100_bases TCGCTTCCAGCAACGCGAAGCGGGCGACGATCCGATCCGAGTTCGGCTCGCCGCCCGCTAGCACGGACCCCGGTTACCAA GCGTGCTGTGGGGGTTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentation Induced By CAMP Protein Fic; Heat Repeat-Containing PBS Lyase; LOW QUALITY PROTEIN Oxidoreductase
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTDPLAPLVELPGVAEASEEARNALGRAHRHKTNLRGWPATAAEAALRAARASSVLDGGSLQLADTGEADPVLAGALRVS QALEGGATALVDVWQRAPLQALARLHSLAAADLTDDEHLGRPRADAGVGKRLELLVEILTGGSQAPAPVLAAVAHGELLT LAPFGTADGVVARGVSRLVTITSGLDPHGLGVPEVYWMRQSGDYQAAARGFASGTPDGLTAWLLLSCRALHEGAREALQI ASTSAS
Sequences:
>Translated_246_residues MTDPLAPLVELPGVAEASEEARNALGRAHRHKTNLRGWPATAAEAALRAARASSVLDGGSLQLADTGEADPVLAGALRVS QALEGGATALVDVWQRAPLQALARLHSLAAADLTDDEHLGRPRADAGVGKRLELLVEILTGGSQAPAPVLAAVAHGELLT LAPFGTADGVVARGVSRLVTITSGLDPHGLGVPEVYWMRQSGDYQAAARGFASGTPDGLTAWLLLSCRALHEGAREALQI ASTSAS >Mature_245_residues TDPLAPLVELPGVAEASEEARNALGRAHRHKTNLRGWPATAAEAALRAARASSVLDGGSLQLADTGEADPVLAGALRVSQ ALEGGATALVDVWQRAPLQALARLHSLAAADLTDDEHLGRPRADAGVGKRLELLVEILTGGSQAPAPVLAAVAHGELLTL APFGTADGVVARGVSRLVTITSGLDPHGLGVPEVYWMRQSGDYQAAARGFASGTPDGLTAWLLLSCRALHEGAREALQIA STSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25241; Mature: 25110
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPLAPLVELPGVAEASEEARNALGRAHRHKTNLRGWPATAAEAALRAARASSVLDGGS CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC LQLADTGEADPVLAGALRVSQALEGGATALVDVWQRAPLQALARLHSLAAADLTDDEHLG EEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCC RPRADAGVGKRLELLVEILTGGSQAPAPVLAAVAHGELLTLAPFGTADGVVARGVSRLVT CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH ITSGLDPHGLGVPEVYWMRQSGDYQAAARGFASGTPDGLTAWLLLSCRALHEGAREALQI HHCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ASTSAS HHCCCC >Mature Secondary Structure TDPLAPLVELPGVAEASEEARNALGRAHRHKTNLRGWPATAAEAALRAARASSVLDGGS CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC LQLADTGEADPVLAGALRVSQALEGGATALVDVWQRAPLQALARLHSLAAADLTDDEHLG EEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCC RPRADAGVGKRLELLVEILTGGSQAPAPVLAAVAHGELLTLAPFGTADGVVARGVSRLVT CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH ITSGLDPHGLGVPEVYWMRQSGDYQAAARGFASGTPDGLTAWLLLSCRALHEGAREALQI HHCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ASTSAS HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA