| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801769
Identifier: 108801769
GI number: 108801769
Start: 5089885
End: 5090946
Strand: Reverse
Name: 108801769
Synonym: Mmcs_4806
Alternate gene names: NA
Gene position: 5090946-5089885 (Counterclockwise)
Preceding gene: 108801771
Following gene: 108801768
Centisome position: 89.23
GC content: 76.08
Gene sequence:
>1062_bases ATGACCACCCCAGGCGTACTCGCTCTGCTGAGCGGTCCGACCCTGCGCGACGACGTCGACCGCGTCGCGGCGGCGGCCGC GGTCGTCGTCGTCCACGCCGCCGAACCGTCGAGCCGGAAGGCATGGACCGCCGCGGCGGCCATCCTCCTCGACGGGCAGG CGGCCCGCCGGTGCGCCGCGCAGGCACTGCCCAGACGTGACCGCGTCGTCCTCATCGGGCAGGCACCGCTCGGCGAGGAG CAATGGCACGCCGCGATCGCCGTGGGCGCGCAGCGGGTGCTCACGCTGCCGGAGCAGGAGGGCGACCTGGTCGTCCTGCT CGCCGACGCCGCCGAATCGGTGCGCGACGACGTCCGCCGAGGCCCTGTCGCCGCCGTCGTGGCTGGGCGGGGCGGGGCAG GGGCATCGGTGCTCGCCGCGGCGCTCGCGTTGTCGGTCACCGATGCGCTGCTCGTCGACGTGGATCCCTGGAGCGGTGGG CTGGACCTGCTGCTCGGGGTCGAGACCACGGCCGGACTGCGTTGGCCGGATCTGGCGCTGCGAGCCGGCCGGGTCGGGTA TCCGGCCCTGCGCGACGCGCTGCCTCGGCACGGCGGCGTCACACTGCTGGCGAACGGACGCGGCGGAGGCGAGATCGACC CGACGGCGCTGGCCGCGGTGGTGGAGGCAGGCAGCCGCGGCGGCGCGACAGTAATCTGCGACGTGCCGCGCCGCTCGACC GCGGCGGCCGAGAACGCGCTCGACGCCGCCGATTTGGTGATCATGGTCGTCACCGCCGAGGTCCGGGCATGCGCGGCGGC CGGCGCGATGGTGCCGTGGCTGTCGGCGATCAACCCCAACGTCGGCCTGGTGGTTCGCGGGCCTGCGCCGGGCGGTTTGC GCGCGGCCGAGGTCGCGGCTTCGGTCGGTCTGCCGCTGCTGGCGGCGATGCGACCACAGCCCGGGGTGGCCGCGGCGCTC GAACGCGGTGGTCTGCGGATCGCCCGGCGCGCACCGCTGGCGGCCGCGGCACGCCGCGTGCTGGACGTGCTGCAGCGGCA TCCCGCGGAGGCGGTGGCGTGA
Upstream 100 bases:
>100_bases CGGCCGTCCAGTTGTCCACAGTTGCTGGTTTGTCCACAAGTGGTAACGGAACGGGCCTCAGCGGGCGCTGAGTCGCCGGT CCGCGCGGCACAGTTGGCCC
Downstream 100 bases:
>100_bases CCTCATCGCTGATCGATCGGGTGCGGGAGCGGCTCGCCGCCGAGTCGTCCCCGCTGCATCCGGCGGTCGTCGCGGCCGCG ATCCGGGCGGAGTCGGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTTPGVLALLSGPTLRDDVDRVAAAAAVVVVHAAEPSSRKAWTAAAAILLDGQAARRCAAQALPRRDRVVLIGQAPLGEE QWHAAIAVGAQRVLTLPEQEGDLVVLLADAAESVRDDVRRGPVAAVVAGRGGAGASVLAAALALSVTDALLVDVDPWSGG LDLLLGVETTAGLRWPDLALRAGRVGYPALRDALPRHGGVTLLANGRGGGEIDPTALAAVVEAGSRGGATVICDVPRRST AAAENALDAADLVIMVVTAEVRACAAAGAMVPWLSAINPNVGLVVRGPAPGGLRAAEVAASVGLPLLAAMRPQPGVAAAL ERGGLRIARRAPLAAAARRVLDVLQRHPAEAVA
Sequences:
>Translated_353_residues MTTPGVLALLSGPTLRDDVDRVAAAAAVVVVHAAEPSSRKAWTAAAAILLDGQAARRCAAQALPRRDRVVLIGQAPLGEE QWHAAIAVGAQRVLTLPEQEGDLVVLLADAAESVRDDVRRGPVAAVVAGRGGAGASVLAAALALSVTDALLVDVDPWSGG LDLLLGVETTAGLRWPDLALRAGRVGYPALRDALPRHGGVTLLANGRGGGEIDPTALAAVVEAGSRGGATVICDVPRRST AAAENALDAADLVIMVVTAEVRACAAAGAMVPWLSAINPNVGLVVRGPAPGGLRAAEVAASVGLPLLAAMRPQPGVAAAL ERGGLRIARRAPLAAAARRVLDVLQRHPAEAVA >Mature_352_residues TTPGVLALLSGPTLRDDVDRVAAAAAVVVVHAAEPSSRKAWTAAAAILLDGQAARRCAAQALPRRDRVVLIGQAPLGEEQ WHAAIAVGAQRVLTLPEQEGDLVVLLADAAESVRDDVRRGPVAAVVAGRGGAGASVLAAALALSVTDALLVDVDPWSGGL DLLLGVETTAGLRWPDLALRAGRVGYPALRDALPRHGGVTLLANGRGGGEIDPTALAAVVEAGSRGGATVICDVPRRSTA AAENALDAADLVIMVVTAEVRACAAAGAMVPWLSAINPNVGLVVRGPAPGGLRAAEVAASVGLPLLAAMRPQPGVAAALE RGGLRIARRAPLAAAARRVLDVLQRHPAEAVA
Specific function: May play a role in septum formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022521 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35593; Mature: 35462
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPGVLALLSGPTLRDDVDRVAAAAAVVVVHAAEPSSRKAWTAAAAILLDGQAARRCAA CCCCCEEEEECCCCCHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHEECCHHHHHHHH QALPRRDRVVLIGQAPLGEEQWHAAIAVGAQRVLTLPEQEGDLVVLLADAAESVRDDVRR HHCCCCCCEEEEECCCCCHHHHHHHHHHCCHHEEECCCCCCCEEEEECCHHHHHHHHHHC GPVAAVVAGRGGAGASVLAAALALSVTDALLVDVDPWSGGLDLLLGVETTAGLRWPDLAL CCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCHHHH RAGRVGYPALRDALPRHGGVTLLANGRGGGEIDPTALAAVVEAGSRGGATVICDVPRRST HCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCH AAAENALDAADLVIMVVTAEVRACAAAGAMVPWLSAINPNVGLVVRGPAPGGLRAAEVAA HHHHHCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHH SVGLPLLAAMRPQPGVAAALERGGLRIARRAPLAAAARRVLDVLQRHPAEAVA HCCCHHHHHCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure TTPGVLALLSGPTLRDDVDRVAAAAAVVVVHAAEPSSRKAWTAAAAILLDGQAARRCAA CCCCEEEEECCCCCHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHEECCHHHHHHHH QALPRRDRVVLIGQAPLGEEQWHAAIAVGAQRVLTLPEQEGDLVVLLADAAESVRDDVRR HHCCCCCCEEEEECCCCCHHHHHHHHHHCCHHEEECCCCCCCEEEEECCHHHHHHHHHHC GPVAAVVAGRGGAGASVLAAALALSVTDALLVDVDPWSGGLDLLLGVETTAGLRWPDLAL CCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCHHHH RAGRVGYPALRDALPRHGGVTLLANGRGGGEIDPTALAAVVEAGSRGGATVICDVPRRST HCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCH AAAENALDAADLVIMVVTAEVRACAAAGAMVPWLSAINPNVGLVVRGPAPGGLRAAEVAA HHHHHCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHH SVGLPLLAAMRPQPGVAAALERGGLRIARRAPLAAAARRVLDVLQRHPAEAVA HCCCHHHHHCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]