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The map label for this gene is lsr2 [H]

Identifier: 108801720

GI number: 108801720

Start: 5034605

End: 5034946

Strand: Reverse

Name: lsr2 [H]

Synonym: Mmcs_4757

Alternate gene names: 108801720

Gene position: 5034946-5034605 (Counterclockwise)

Preceding gene: 108801721

Following gene: 108801719

Centisome position: 88.25

GC content: 65.2

Gene sequence:

>342_bases
ATGGCGAAGAAAGTCACCGTCACGTTGGTCGATGATTTCGACGGTGAAGGTACCGCCGATGAAACGGTTGAATTCGGGCT
CGACGGAGTCAGCTATGAGATCGACCTCTCCAGCAAGAATGCCAAGAAGCTCCGCGAAGACCTGAAACAGTGGGTCGAGG
CCGGACGTCGCGTCGGCGGTCGTCGTCGCGGCCGCGCCACCGGACCCACCAGGGGCCGCGGCGCCATCGATCGCGAGCAG
AGCGCCGCGATCCGCGAGTGGGCCCGCCGCAACGGCCACAATGTCTCGACCAGAGGCCGTATCCCCGCCGACGTCATCGA
CGCGTTCCACGCCGCCACCTAG

Upstream 100 bases:

>100_bases
GCGTCGTTGAATAGTGTAGATTTATATGGCACATTGGAGGCCGAGAATCCGGTAGCCAAAACTATCCACCAAGCGCAGGT
AGAAGGGTCAGTGTGAACTG

Downstream 100 bases:

>100_bases
CGCCGTACGATAAACGGGCAACGCGTTCGCGCGTTGCCCGTTTTGCGTCTTCTCCCCAGGTGGACGGGTTTCGCTGGTGG
CGAACCGATCGCCGGCCGGC

Product: DNA-bridging protein Lsr2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAKKVTVTLVDDFDGEGTADETVEFGLDGVSYEIDLSSKNAKKLREDLKQWVEAGRRVGGRRRGRATGPTRGRGAIDREQ
SAAIREWARRNGHNVSTRGRIPADVIDAFHAAT

Sequences:

>Translated_113_residues
MAKKVTVTLVDDFDGEGTADETVEFGLDGVSYEIDLSSKNAKKLREDLKQWVEAGRRVGGRRRGRATGPTRGRGAIDREQ
SAAIREWARRNGHNVSTRGRIPADVIDAFHAAT
>Mature_112_residues
AKKVTVTLVDDFDGEGTADETVEFGLDGVSYEIDLSSKNAKKLREDLKQWVEAGRRVGGRRRGRATGPTRGRGAIDREQS
AAIREWARRNGHNVSTRGRIPADVIDAFHAAT

Specific function: Dominant T-cell antigen and stimulates lymphoproliferation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12423; Mature: 12292

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKVTVTLVDDFDGEGTADETVEFGLDGVSYEIDLSSKNAKKLREDLKQWVEAGRRVGG
CCCEEEEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
RRRGRATGPTRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAFHAAT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AKKVTVTLVDDFDGEGTADETVEFGLDGVSYEIDLSSKNAKKLREDLKQWVEAGRRVGG
CCEEEEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
RRRGRATGPTRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAFHAAT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]