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The map label for this gene is yngJ [H]

Identifier: 108801638

GI number: 108801638

Start: 4955816

End: 4956979

Strand: Reverse

Name: yngJ [H]

Synonym: Mmcs_4675

Alternate gene names: 108801638

Gene position: 4956979-4955816 (Counterclockwise)

Preceding gene: 108801639

Following gene: 108801637

Centisome position: 86.88

GC content: 66.49

Gene sequence:

>1164_bases
ATGTTCATCGATCTGACGCCTGAGCAGCGGCGGCTGCAAGCTGAACTGCGGGAGTACTTCTCGACGCTCATCTCGCCCGG
AGAGCGCGATGCCATGGAGACCGACCGGCACAATGAGGCCTACCGCGCGGTGATCAAGCGGATGGGCGCCGACGGCAAGC
TCGGTGTCGGCTGGCCGAAGGAGTTCGGCGGCTTGGGTTTCGGCCCCGTCGAACAGTCGATCTTCGTCAACGAGGCGGCC
CGCGCGGACGTCCCGCTGCCCGCGGTCACGTTGCAGACCGTGGGCCCCACGCTGCAGGTGTACGGCACCGAAGCGCAGAA
GAAGAAGTTCCTGCCGGCGATCCTCGCCGGTGAGGTGCACTTCGCGATCGGCTACTCCGAACCCGAAGCCGGCACCGATC
TGGCGTCGCTGCGGACCTCGGCGGTGCGGCACGGTGACGAGTACATCGTGAACGGGCAGAAGATGTGGACCACCGGCGCG
CACGACGCCGACTACATCTGGCTGGCGGCGCGCACCGACCCGGAAGCCGCGAAACACAAGGGCATTTCGATCTTGATCGT
CGACACCAAGGATCCTGGCTACTCCTGGACGCCGATCATCCTGTCCGACGGCGCGCACCACACCAACGCCAGCTACTACA
ACGACGTCCACGTGCCCGCCGACATGCTCGTCGGTGAGGAGAACGCGGGCTGGAAGCTGATCACCACCCAGCTCAACCAC
GAGCGCGTCATGCTCGGACCGGCGGGCAAGGTGGCCGGCATCTACGACCGCGTGCACGCGTGGGCGTCGAAGCCCGGATC
CAACGGGGTGACGCCACTCGAGAACGACAACGTGCGGCGCGCGCTGGGGGAGATCCGCGCGGTCTGGCGGATCAACGAGC
TGCTCAACTGGCAGGTCGCCGCGGCCGGGGAGACCATCGCGGTCGCCGACGCCGCCGCCACGAAAGTGTTTTCAACAGAA
CGTATTCAGCGGATCGGCCGGCTCGCCGAGGAGATCGTCGGCGCCTACGGCAACCCGGCCGAACCCGATACCGCAGAACT
ACTGCGGTGGCTCGACAGCCAGACCAAACGCAACCTCGTCATCACCTTCGGAGGCGGGGTCAACGAGGTCATGCGCGAGA
TGATCGCGGCGTCCGGTCTCAAGGTGCCGAGGGTGCCGCGATGA

Upstream 100 bases:

>100_bases
TGGACATCACCTACCCGATGGACCGCTACTACTCGACGATCAAGGACCTGTCCCGGTTACTGGGTGGCCCGTCGCATCGT
CTGGACCTGGTGGGAGTTTG

Downstream 100 bases:

>100_bases
GCGCTTGCGCGAAGAGCGAGGGACAGCGGTGACGGCCCCGGATCTGCAGCCCGACATCGAGAAGATCAAGGCAGAGGGTA
AGAGCGAGCCGCGTGCCGGC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MFIDLTPEQRRLQAELREYFSTLISPGERDAMETDRHNEAYRAVIKRMGADGKLGVGWPKEFGGLGFGPVEQSIFVNEAA
RADVPLPAVTLQTVGPTLQVYGTEAQKKKFLPAILAGEVHFAIGYSEPEAGTDLASLRTSAVRHGDEYIVNGQKMWTTGA
HDADYIWLAARTDPEAAKHKGISILIVDTKDPGYSWTPIILSDGAHHTNASYYNDVHVPADMLVGEENAGWKLITTQLNH
ERVMLGPAGKVAGIYDRVHAWASKPGSNGVTPLENDNVRRALGEIRAVWRINELLNWQVAAAGETIAVADAAATKVFSTE
RIQRIGRLAEEIVGAYGNPAEPDTAELLRWLDSQTKRNLVITFGGGVNEVMREMIAASGLKVPRVPR

Sequences:

>Translated_387_residues
MFIDLTPEQRRLQAELREYFSTLISPGERDAMETDRHNEAYRAVIKRMGADGKLGVGWPKEFGGLGFGPVEQSIFVNEAA
RADVPLPAVTLQTVGPTLQVYGTEAQKKKFLPAILAGEVHFAIGYSEPEAGTDLASLRTSAVRHGDEYIVNGQKMWTTGA
HDADYIWLAARTDPEAAKHKGISILIVDTKDPGYSWTPIILSDGAHHTNASYYNDVHVPADMLVGEENAGWKLITTQLNH
ERVMLGPAGKVAGIYDRVHAWASKPGSNGVTPLENDNVRRALGEIRAVWRINELLNWQVAAAGETIAVADAAATKVFSTE
RIQRIGRLAEEIVGAYGNPAEPDTAELLRWLDSQTKRNLVITFGGGVNEVMREMIAASGLKVPRVPR
>Mature_387_residues
MFIDLTPEQRRLQAELREYFSTLISPGERDAMETDRHNEAYRAVIKRMGADGKLGVGWPKEFGGLGFGPVEQSIFVNEAA
RADVPLPAVTLQTVGPTLQVYGTEAQKKKFLPAILAGEVHFAIGYSEPEAGTDLASLRTSAVRHGDEYIVNGQKMWTTGA
HDADYIWLAARTDPEAAKHKGISILIVDTKDPGYSWTPIILSDGAHHTNASYYNDVHVPADMLVGEENAGWKLITTQLNH
ERVMLGPAGKVAGIYDRVHAWASKPGSNGVTPLENDNVRRALGEIRAVWRINELLNWQVAAAGETIAVADAAATKVFSTE
RIQRIGRLAEEIVGAYGNPAEPDTAELLRWLDSQTKRNLVITFGGGVNEVMREMIAASGLKVPRVPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=265, Percent_Identity=33.5849056603774, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI226958414, Length=222, Percent_Identity=34.2342342342342, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI4501857, Length=381, Percent_Identity=24.9343832020997, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI76496475, Length=400, Percent_Identity=28, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI4557235, Length=400, Percent_Identity=28, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI4557231, Length=359, Percent_Identity=26.7409470752089, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI187960098, Length=359, Percent_Identity=26.7409470752089, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI21361497, Length=382, Percent_Identity=25.9162303664921, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI7656849, Length=405, Percent_Identity=25.4320987654321, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI4557233, Length=351, Percent_Identity=24.7863247863248, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4501859, Length=329, Percent_Identity=24.3161094224924, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI211971008, Length=297, Percent_Identity=25.2525252525253, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI48976061, Length=297, Percent_Identity=25.2525252525253, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI38505218, Length=156, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=24.7395833333333, Blast_Score=92, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=381, Percent_Identity=25.9842519685039, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17508101, Length=329, Percent_Identity=26.4437689969605, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17534899, Length=363, Percent_Identity=25.3443526170799, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=326, Percent_Identity=26.9938650306748, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=360, Percent_Identity=24.4444444444444, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI71990804, Length=297, Percent_Identity=25.5892255892256, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17570075, Length=360, Percent_Identity=26.1111111111111, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17551932, Length=351, Percent_Identity=25.9259259259259, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17505929, Length=216, Percent_Identity=31.0185185185185, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI32563615, Length=212, Percent_Identity=32.0754716981132, Blast_Score=95, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI71982178, Length=268, Percent_Identity=26.1194029850746, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=399, Percent_Identity=24.0601503759398, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=252, Percent_Identity=26.5873015873016, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=363, Percent_Identity=23.6914600550964, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17534353, Length=229, Percent_Identity=28.3842794759825, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=26.246719160105, Blast_Score=118, Evalue=8e-27,
Organism=Drosophila melanogaster, GI281363737, Length=395, Percent_Identity=25.8227848101266, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI21356377, Length=389, Percent_Identity=26.4781491002571, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24660351, Length=362, Percent_Identity=26.5193370165746, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646207, Length=306, Percent_Identity=28.4313725490196, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24666513, Length=220, Percent_Identity=30.4545454545455, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI19920834, Length=247, Percent_Identity=29.5546558704453, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42327; Mature: 42327

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIDLTPEQRRLQAELREYFSTLISPGERDAMETDRHNEAYRAVIKRMGADGKLGVGWPK
CEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCH
EFGGLGFGPVEQSIFVNEAARADVPLPAVTLQTVGPTLQVYGTEAQKKKFLPAILAGEVH
HHCCCCCCCCCHHHHHCCHHCCCCCCCEEEHHHCCCEEEEECCCHHHHHCCHHHHCCCEE
FAIGYSEPEAGTDLASLRTSAVRHGDEYIVNGQKMWTTGAHDADYIWLAARTDPEAAKHK
EEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCEEEEEECCCHHHHHHC
GISILIVDTKDPGYSWTPIILSDGAHHTNASYYNDVHVPADMLVGEENAGWKLITTQLNH
CCEEEEEECCCCCCEECEEEEECCCCCCCCCCCCCCCCCHHHEECCCCCCEEEEEEECCC
ERVMLGPAGKVAGIYDRVHAWASKPGSNGVTPLENDNVRRALGEIRAVWRINELLNWQVA
CEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEE
AAGETIAVADAAATKVFSTERIQRIGRLAEEIVGAYGNPAEPDTAELLRWLDSQTKRNLV
ECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE
ITFGGGVNEVMREMIAASGLKVPRVPR
EEECCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFIDLTPEQRRLQAELREYFSTLISPGERDAMETDRHNEAYRAVIKRMGADGKLGVGWPK
CEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCH
EFGGLGFGPVEQSIFVNEAARADVPLPAVTLQTVGPTLQVYGTEAQKKKFLPAILAGEVH
HHCCCCCCCCCHHHHHCCHHCCCCCCCEEEHHHCCCEEEEECCCHHHHHCCHHHHCCCEE
FAIGYSEPEAGTDLASLRTSAVRHGDEYIVNGQKMWTTGAHDADYIWLAARTDPEAAKHK
EEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCEEEEEECCCHHHHHHC
GISILIVDTKDPGYSWTPIILSDGAHHTNASYYNDVHVPADMLVGEENAGWKLITTQLNH
CCEEEEEECCCCCCEECEEEEECCCCCCCCCCCCCCCCCHHHEECCCCCCEEEEEEECCC
ERVMLGPAGKVAGIYDRVHAWASKPGSNGVTPLENDNVRRALGEIRAVWRINELLNWQVA
CEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEE
AAGETIAVADAAATKVFSTERIQRIGRLAEEIVGAYGNPAEPDTAELLRWLDSQTKRNLV
ECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE
ITFGGGVNEVMREMIAASGLKVPRVPR
EEECCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]