| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108801508
Identifier: 108801508
GI number: 108801508
Start: 4816741
End: 4818498
Strand: Reverse
Name: 108801508
Synonym: Mmcs_4545
Alternate gene names: NA
Gene position: 4818498-4816741 (Counterclockwise)
Preceding gene: 108801509
Following gene: 108801507
Centisome position: 84.45
GC content: 69.34
Gene sequence:
>1758_bases GTGAGAGCACAGACCGATCAGATCTCCGGTGACACCGTCACCGACACTCCCGAACGCCCGCGGCGCCACCCCTTGCTCAT CCGGGTGTGGGGCCTCATCCGCCTCGACTACACCGGCATCGCCTTCGGCGCCCTGTTCTTCTGCCTGTCCCTGACCCCTT CGCTGCTGCCGCGCGACTGGCTGTTCCAGGGACTGATCGGCGGGGCGAACGCCGCCATCGGATACGGCATCGGCGTGTTC ATCTCGAAGATGTTGGTGCGCTTCGTCATAGGCGGGAGACGCGCGTGGCTGCCGTCGCGCCGGACGCTGTACGCGGTCAA GACCGGGGTCGTCGGTTTGGCGATCGCGGCCAGCGTCCTGATGCTCGTACCGGCGGCGGCCTGGCAGCGGCAGGTCTCGG CCGAGATGGGCATGCCGGGCCCGGAGACGTCCGGCTACTTCCGAGTGCTGGTCGTCGCGGCGCTTGCCGGCGGGGTGTGT GTCGCGGTCAGTCGGGTGGTGCTCGGCATCATCAAGACGCTGGCCCGCTGGCTCATCCGCCGGTGGCGTCTGAGCGACGA GATGGCGCTGCTGATCGGCACCGCGGCCATCGTGGTGCTGCTCATCACCTTGATCAACGGCGTACTGCTGCAGGGGTTCC TGGCCGGTGCCAGCCGTGTCTTCCAGCCGCAGAACTTCACCACCCGCGAGGGCGTCAGCCAGCCCACCCAACCCGAGAGA TCCGGCAGCCCAGCATCGTTCGCCAGTTGGGACAGCCTGGGCTACCAGGGCCGCAACTTCGTCGGCAGCGGCCCGGACGC ACGAGAACTGGAGCGGGTGAACGGCAGGCCCGCGCAGGAGCCGATCCGCGTCTACGCCGGCCTGCAGACCGCGGACACCG ACGAACAGCGAATCGCCGTGCTGCTCAGCGAACTCGAGCGCACCCGGGCCTTCGACCGTGAACTGCTCGTGATCGTGCCC ACCACGGGGACCGGATGGGTCAACCCCGTCGCCGCCCGCGCGATCGAGCTGATGTACAACGGCGACACCGCCATGGTGGC GATGCAGTATTCGTATCTGCCGAGCTGGATCTCGTTCCTCGGCGATCAGCAGCGGTCGATGGAGTCGGGACGCATGCTGA TCGACGCCGTACAGCAGCGGTGGTCACAGCGGCCGGCGCAGCAGCGGCCGAAACTCGTGCTCTACGGCGAGAGTCTGGGC TCGATGGCCGGGCAGGCCGCGTTCGCCTGGCTGCCCGACATCGCCGACATGGGGTTCTCGTCGGTGCTGTGGGTCGGCCC GCCCAACGCCAGCCCCCTGTGGAAGGCGATCACGGACCGCCGCGACCCCGGGACCCCGGAGGTCGAGCCACGCTACGACG GTGGCCGTACCGTGCGGTTCTCGCCGGCGACCGATCCGGCCGAGATCGCCCGCGACACCGCGCCCCCGTGGGAGGGCACC CGGGTGCTGTTCCTGCAGCACGCGTCCGACCCGATCGTCTGGTACTCACCGGATCTGCTCACCGCCCGCCCGGACTGGCT GCGCGAGCCGCCGGGTAGGGACCGCACCTCATCGATGCGCTGGTACCCCATCGTGACGTTCTGGCAGGTGGGTGCCGATA TGACCAACGCGTCCAGTGTGCCGGCCGGACACGGTCACAACTACGGCGAATCCGTGCTCGACGGCTGGGCGGCCGTCGCG CCACCGCCCGACTGGACGGCGGCGGACACCGAACGCATCCGCGCCTCACTGCGCGAGTCGGGCGGTCCCGAATACTGA
Upstream 100 bases:
>100_bases TCGATCCCGGCAGCGATGCGGTCGAAGTGCAGGGCCACTTCACGGTGCCACTGGCGGAACTGCGGACCACCTCCGAGGGC GTGTTGCCCGGACTGTTCGG
Downstream 100 bases:
>100_bases TGCGGCGCAACGAGGTAGCGGCCCTCACCCTCGCCACCGCCCTGGTCGCGCTCAGCGGTCTGGTGAGTCCCCGCCTTCCC GAACGATGGGCCGCGGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MRAQTDQISGDTVTDTPERPRRHPLLIRVWGLIRLDYTGIAFGALFFCLSLTPSLLPRDWLFQGLIGGANAAIGYGIGVF ISKMLVRFVIGGRRAWLPSRRTLYAVKTGVVGLAIAASVLMLVPAAAWQRQVSAEMGMPGPETSGYFRVLVVAALAGGVC VAVSRVVLGIIKTLARWLIRRWRLSDEMALLIGTAAIVVLLITLINGVLLQGFLAGASRVFQPQNFTTREGVSQPTQPER SGSPASFASWDSLGYQGRNFVGSGPDARELERVNGRPAQEPIRVYAGLQTADTDEQRIAVLLSELERTRAFDRELLVIVP TTGTGWVNPVAARAIELMYNGDTAMVAMQYSYLPSWISFLGDQQRSMESGRMLIDAVQQRWSQRPAQQRPKLVLYGESLG SMAGQAAFAWLPDIADMGFSSVLWVGPPNASPLWKAITDRRDPGTPEVEPRYDGGRTVRFSPATDPAEIARDTAPPWEGT RVLFLQHASDPIVWYSPDLLTARPDWLREPPGRDRTSSMRWYPIVTFWQVGADMTNASSVPAGHGHNYGESVLDGWAAVA PPPDWTAADTERIRASLRESGGPEY
Sequences:
>Translated_585_residues MRAQTDQISGDTVTDTPERPRRHPLLIRVWGLIRLDYTGIAFGALFFCLSLTPSLLPRDWLFQGLIGGANAAIGYGIGVF ISKMLVRFVIGGRRAWLPSRRTLYAVKTGVVGLAIAASVLMLVPAAAWQRQVSAEMGMPGPETSGYFRVLVVAALAGGVC VAVSRVVLGIIKTLARWLIRRWRLSDEMALLIGTAAIVVLLITLINGVLLQGFLAGASRVFQPQNFTTREGVSQPTQPER SGSPASFASWDSLGYQGRNFVGSGPDARELERVNGRPAQEPIRVYAGLQTADTDEQRIAVLLSELERTRAFDRELLVIVP TTGTGWVNPVAARAIELMYNGDTAMVAMQYSYLPSWISFLGDQQRSMESGRMLIDAVQQRWSQRPAQQRPKLVLYGESLG SMAGQAAFAWLPDIADMGFSSVLWVGPPNASPLWKAITDRRDPGTPEVEPRYDGGRTVRFSPATDPAEIARDTAPPWEGT RVLFLQHASDPIVWYSPDLLTARPDWLREPPGRDRTSSMRWYPIVTFWQVGADMTNASSVPAGHGHNYGESVLDGWAAVA PPPDWTAADTERIRASLRESGGPEY >Mature_585_residues MRAQTDQISGDTVTDTPERPRRHPLLIRVWGLIRLDYTGIAFGALFFCLSLTPSLLPRDWLFQGLIGGANAAIGYGIGVF ISKMLVRFVIGGRRAWLPSRRTLYAVKTGVVGLAIAASVLMLVPAAAWQRQVSAEMGMPGPETSGYFRVLVVAALAGGVC VAVSRVVLGIIKTLARWLIRRWRLSDEMALLIGTAAIVVLLITLINGVLLQGFLAGASRVFQPQNFTTREGVSQPTQPER SGSPASFASWDSLGYQGRNFVGSGPDARELERVNGRPAQEPIRVYAGLQTADTDEQRIAVLLSELERTRAFDRELLVIVP TTGTGWVNPVAARAIELMYNGDTAMVAMQYSYLPSWISFLGDQQRSMESGRMLIDAVQQRWSQRPAQQRPKLVLYGESLG SMAGQAAFAWLPDIADMGFSSVLWVGPPNASPLWKAITDRRDPGTPEVEPRYDGGRTVRFSPATDPAEIARDTAPPWEGT RVLFLQHASDPIVWYSPDLLTARPDWLREPPGRDRTSSMRWYPIVTFWQVGADMTNASSVPAGHGHNYGESVLDGWAAVA PPPDWTAADTERIRASLRESGGPEY
Specific function: Unknown
COG id: COG4425
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64145; Mature: 64145
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAQTDQISGDTVTDTPERPRRHPLLIRVWGLIRLDYTGIAFGALFFCLSLTPSLLPRDW CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHEECCHHHHHHHHHHHHHCCHHHCCHHH LFQGLIGGANAAIGYGIGVFISKMLVRFVIGGRRAWLPSRRTLYAVKTGVVGLAIAASVL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHH MLVPAAAWQRQVSAEMGMPGPETSGYFRVLVVAALAGGVCVAVSRVVLGIIKTLARWLIR HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH RWRLSDEMALLIGTAAIVVLLITLINGVLLQGFLAGASRVFQPQNFTTREGVSQPTQPER HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCC SGSPASFASWDSLGYQGRNFVGSGPDARELERVNGRPAQEPIRVYAGLQTADTDEQRIAV CCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHH LLSELERTRAFDRELLVIVPTTGTGWVNPVAARAIELMYNGDTAMVAMQYSYLPSWISFL HHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHEEECCCEEEEEEEHHHHHHHHHHH GDQQRSMESGRMLIDAVQQRWSQRPAQQRPKLVLYGESLGSMAGQAAFAWLPDIADMGFS CCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHCCCC SVLWVGPPNASPLWKAITDRRDPGTPEVEPRYDGGRTVRFSPATDPAEIARDTAPPWEGT CEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCC RVLFLQHASDPIVWYSPDLLTARPDWLREPPGRDRTSSMRWYPIVTFWQVGADMTNASSV EEEEEEECCCCEEEECCCCCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCC PAGHGHNYGESVLDGWAAVAPPPDWTAADTERIRASLRESGGPEY CCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRAQTDQISGDTVTDTPERPRRHPLLIRVWGLIRLDYTGIAFGALFFCLSLTPSLLPRDW CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHEECCHHHHHHHHHHHHHCCHHHCCHHH LFQGLIGGANAAIGYGIGVFISKMLVRFVIGGRRAWLPSRRTLYAVKTGVVGLAIAASVL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHH MLVPAAAWQRQVSAEMGMPGPETSGYFRVLVVAALAGGVCVAVSRVVLGIIKTLARWLIR HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH RWRLSDEMALLIGTAAIVVLLITLINGVLLQGFLAGASRVFQPQNFTTREGVSQPTQPER HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCC SGSPASFASWDSLGYQGRNFVGSGPDARELERVNGRPAQEPIRVYAGLQTADTDEQRIAV CCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHH LLSELERTRAFDRELLVIVPTTGTGWVNPVAARAIELMYNGDTAMVAMQYSYLPSWISFL HHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHEEECCCEEEEEEEHHHHHHHHHHH GDQQRSMESGRMLIDAVQQRWSQRPAQQRPKLVLYGESLGSMAGQAAFAWLPDIADMGFS CCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHCCCC SVLWVGPPNASPLWKAITDRRDPGTPEVEPRYDGGRTVRFSPATDPAEIARDTAPPWEGT CEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCC RVLFLQHASDPIVWYSPDLLTARPDWLREPPGRDRTSSMRWYPIVTFWQVGADMTNASSV EEEEEEECCCCEEEECCCCCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCC PAGHGHNYGESVLDGWAAVAPPPDWTAADTERIRASLRESGGPEY CCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA