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The map label for this gene is glnR [H]

Identifier: 108801488

GI number: 108801488

Start: 4801953

End: 4802726

Strand: Reverse

Name: glnR [H]

Synonym: Mmcs_4525

Alternate gene names: 108801488

Gene position: 4802726-4801953 (Counterclockwise)

Preceding gene: 108801498

Following gene: 108801487

Centisome position: 84.18

GC content: 71.83

Gene sequence:

>774_bases
GTGGATCTACTGCTGTTGACCGTCGACCCGCACCCCGAGTCGGTTCTGCCGTCATTGTCGCTGCTCGCGCACAACGTGCG
GGCCGCCCCGACCGAGGTCTCGTCCCTGCTGGAGGCCGGCACCGCCGACGTCGCGATCGTCGACGCCCGCACCGACCTGG
CCGCCGCGCGTGGCCTGTGCCGCCTGCTCGGCACGACGGGGACGTCGGTGCCCGTGGTGGCGGTGGTCACCGAGGGCGGC
CTGGTGGCCGTCAACCACGAGTGGGGCCTCGACGAGATCCTGCTGCCCGGGACGGGGCCCGCCGAGATCGACGCGCGCCT
ACGACTGCTGGTCGGGCGTCGCGGCGGCGTCGCGAATCAGGAGAACGCCGGCAAGATCAGCCTCGGTGAGCTGGTGATCG
ACGAGGGCACCTACACGGCCCGGCTGCGGGGCCGCCCGCTGGACCTGACCTACAAGGAATTCGAACTGCTGAAGTACCTC
GCCCAGCACGCCGGCCGGGTGTTCACCCGCGCCCAGCTACTGCAGGAGGTGTGGGGTTACGACTTCTTCGGCGGCACCCG
CACCGTCGACGTGCACGTGCGACGGCTGCGCGCCAAACTCGGCCCCGAATACGAATCGCTGATCGGCACCGTGCGCAACG
TGGGCTACAAGGCGGTACGGCCCGCCCGGGGCCGCCCGCCCGCGCCGGAGGCCGAACTCTCCGACGACGAGGACGACTAC
GAGACGCCCGACAGCGTGCCGCCGTCGCTGGCGGACCCGTTGCGCGCGCCGTGA

Upstream 100 bases:

>100_bases
ACTTAGCCAACGGTCGGTAACGGCCGTGTGTCAGGCACAAATCTGGGAGATCACCGCAGACATCGACGTCGGGCGACGCC
CCCGGACTGCTGGAGGGCCT

Downstream 100 bases:

>100_bases
CGTCGATCGACTGGCGGAGCGCACTCACCGACGACGAACAGGGCAGCATCCGCGACATCGTCGCCGCCGCGACGCGCCAC
GACGGGGTCGCCCCCGTGGG

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDLLLLTVDPHPESVLPSLSLLAHNVRAAPTEVSSLLEAGTADVAIVDARTDLAAARGLCRLLGTTGTSVPVVAVVTEGG
LVAVNHEWGLDEILLPGTGPAEIDARLRLLVGRRGGVANQENAGKISLGELVIDEGTYTARLRGRPLDLTYKEFELLKYL
AQHAGRVFTRAQLLQEVWGYDFFGGTRTVDVHVRRLRAKLGPEYESLIGTVRNVGYKAVRPARGRPPAPEAELSDDEDDY
ETPDSVPPSLADPLRAP

Sequences:

>Translated_257_residues
MDLLLLTVDPHPESVLPSLSLLAHNVRAAPTEVSSLLEAGTADVAIVDARTDLAAARGLCRLLGTTGTSVPVVAVVTEGG
LVAVNHEWGLDEILLPGTGPAEIDARLRLLVGRRGGVANQENAGKISLGELVIDEGTYTARLRGRPLDLTYKEFELLKYL
AQHAGRVFTRAQLLQEVWGYDFFGGTRTVDVHVRRLRAKLGPEYESLIGTVRNVGYKAVRPARGRPPAPEAELSDDEDDY
ETPDSVPPSLADPLRAP
>Mature_257_residues
MDLLLLTVDPHPESVLPSLSLLAHNVRAAPTEVSSLLEAGTADVAIVDARTDLAAARGLCRLLGTTGTSVPVVAVVTEGG
LVAVNHEWGLDEILLPGTGPAEIDARLRLLVGRRGGVANQENAGKISLGELVIDEGTYTARLRGRPLDLTYKEFELLKYL
AQHAGRVFTRAQLLQEVWGYDFFGGTRTVDVHVRRLRAKLGPEYESLIGTVRNVGYKAVRPARGRPPAPEAELSDDEDDY
ETPDSVPPSLADPLRAP

Specific function: Activates the transcription of the glnA gene [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786784, Length=183, Percent_Identity=31.1475409836066, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786599, Length=132, Percent_Identity=34.8484848484849, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788394, Length=163, Percent_Identity=33.1288343558282, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789402, Length=128, Percent_Identity=36.71875, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87082012, Length=90, Percent_Identity=41.1111111111111, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790860, Length=179, Percent_Identity=32.9608938547486, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789809, Length=170, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI2367329, Length=160, Percent_Identity=31.875, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27669; Mature: 27669

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLLLTVDPHPESVLPSLSLLAHNVRAAPTEVSSLLEAGTADVAIVDARTDLAAARGLC
CCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
RLLGTTGTSVPVVAVVTEGGLVAVNHEWGLDEILLPGTGPAEIDARLRLLVGRRGGVANQ
HHHCCCCCCCCEEEEEECCCEEEEECCCCCCEEEECCCCCHHHHHEEEEEEECCCCCCCC
ENAGKISLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGY
CCCCCEEECCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DFFGGTRTVDVHVRRLRAKLGPEYESLIGTVRNVGYKAVRPARGRPPAPEAELSDDEDDY
CCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
ETPDSVPPSLADPLRAP
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLLLLTVDPHPESVLPSLSLLAHNVRAAPTEVSSLLEAGTADVAIVDARTDLAAARGLC
CCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
RLLGTTGTSVPVVAVVTEGGLVAVNHEWGLDEILLPGTGPAEIDARLRLLVGRRGGVANQ
HHHCCCCCCCCEEEEEECCCEEEEECCCCCCEEEECCCCCHHHHHEEEEEEECCCCCCCC
ENAGKISLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGY
CCCCCEEECCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DFFGGTRTVDVHVRRLRAKLGPEYESLIGTVRNVGYKAVRPARGRPPAPEAELSDDEDDY
CCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
ETPDSVPPSLADPLRAP
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7688332; 12000953 [H]