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The map label for this gene is ycjP [C]

Identifier: 108801319

GI number: 108801319

Start: 4635027

End: 4635896

Strand: Reverse

Name: ycjP [C]

Synonym: Mmcs_4355

Alternate gene names: 108801319

Gene position: 4635896-4635027 (Counterclockwise)

Preceding gene: 108801320

Following gene: 108801318

Centisome position: 81.25

GC content: 62.99

Gene sequence:

>870_bases
ATGACCACCACAGTGGAAGAGACCACGCCGACAACGGGTTCCGATATCACCGCGAAGAAGAAGTCCCGCAAGTTCTCCGT
CTGGGGCGTGCTGGCATGGCTCGTCGGGCTCGGGTTCTTCTTCCCGGTGTTCTGGATGATCCTGACGTCGTTCAAACAGG
AGGGTGACGCGGCGACCGATCCGCCGAAGTTGTTCTTCACCCCGACGCTCGACCAGTACGGCGCGGTGTTCGATCAGGGC
ATCGGACCGGCGATGCTGAACTCGTTGTTCGCCACCGGACTTTCGACGATCCTGGTGCTGCTGCTGGGTACCCCCGCAGC
GTTCGCGCTGTCGCTGCGCCCGGTGCGCAAGACGCAGGACGCGTTGTTCTTCTTCATGAGCACGAAGATGCTGCCCATCG
TGGCGGTGATCCTGCCGCTGTATGTGATCGTGTCGAACATCGGTCTGCTCGACAACATCTGGGCACTGGTGATCCTCTAC
ACCGCGATGAACCTGCCGATCGCGGTGTGGATGATGCGGTCGTTCTTCCTCGAGGTGCCGGCTGAACTGCTCGAGGCGGC
CAGCCTCGACGGTGCGAGCCTGTGGCGGTCGGTGCGTGAGGTGATCCTCCCGCTGGTCTCACCCGGCATCGCGGCGACGG
CGTTGATCTGTGTGATCTTCGCCTGGAACGAGTTCTTCTTCGCGGTGAACCTGACCGCCGTGAACGCCCAGACCATGCCC
GTGTACCTCGTGGGCTTCATCGCGGGTGAGGGTCAGTACTGGGCCGTGCTCTCGGCGGCCGCGACCATGGCCGCACTCCC
CGTCATCATCTGCGGATGGCTGGCGCAGAACAAGCTGGTGCGCGGGCTTTCCTTCGGGGCGATCAAGTAA

Upstream 100 bases:

>100_bases
CGGCGATGGGCGTCGTGGTGGTCATCTTCACCATCGCCATCGCCAACTTCGCCCTGCGGTTGATCTTCAAATCGTTCTCC
GGCAAGGAAGAGGCAGTCTG

Downstream 100 bases:

>100_bases
ACGGATTCACAGGAGACACGGAGAACGCAATGGCTGCAATCACGTACAAGAACGCGTCGTGCATCTACGAGGGCTCGGAC
AAGCTCGCGGTGGACTCGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTTTVEETTPTTGSDITAKKKSRKFSVWGVLAWLVGLGFFFPVFWMILTSFKQEGDAATDPPKLFFTPTLDQYGAVFDQG
IGPAMLNSLFATGLSTILVLLLGTPAAFALSLRPVRKTQDALFFFMSTKMLPIVAVILPLYVIVSNIGLLDNIWALVILY
TAMNLPIAVWMMRSFFLEVPAELLEAASLDGASLWRSVREVILPLVSPGIAATALICVIFAWNEFFFAVNLTAVNAQTMP
VYLVGFIAGEGQYWAVLSAAATMAALPVIICGWLAQNKLVRGLSFGAIK

Sequences:

>Translated_289_residues
MTTTVEETTPTTGSDITAKKKSRKFSVWGVLAWLVGLGFFFPVFWMILTSFKQEGDAATDPPKLFFTPTLDQYGAVFDQG
IGPAMLNSLFATGLSTILVLLLGTPAAFALSLRPVRKTQDALFFFMSTKMLPIVAVILPLYVIVSNIGLLDNIWALVILY
TAMNLPIAVWMMRSFFLEVPAELLEAASLDGASLWRSVREVILPLVSPGIAATALICVIFAWNEFFFAVNLTAVNAQTMP
VYLVGFIAGEGQYWAVLSAAATMAALPVIICGWLAQNKLVRGLSFGAIK
>Mature_288_residues
TTTVEETTPTTGSDITAKKKSRKFSVWGVLAWLVGLGFFFPVFWMILTSFKQEGDAATDPPKLFFTPTLDQYGAVFDQGI
GPAMLNSLFATGLSTILVLLLGTPAAFALSLRPVRKTQDALFFFMSTKMLPIVAVILPLYVIVSNIGLLDNIWALVILYT
AMNLPIAVWMMRSFFLEVPAELLEAASLDGASLWRSVREVILPLVSPGIAATALICVIFAWNEFFFAVNLTAVNAQTMPV
YLVGFIAGEGQYWAVLSAAATMAALPVIICGWLAQNKLVRGLSFGAIK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=271, Percent_Identity=31.7343173431734, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1790464, Length=209, Percent_Identity=31.1004784688995, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1789860, Length=180, Percent_Identity=32.2222222222222, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31418; Mature: 31286

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTVEETTPTTGSDITAKKKSRKFSVWGVLAWLVGLGFFFPVFWMILTSFKQEGDAATD
CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PPKLFFTPTLDQYGAVFDQGIGPAMLNSLFATGLSTILVLLLGTPAAFALSLRPVRKTQD
CCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHH
ALFFFMSTKMLPIVAVILPLYVIVSNIGLLDNIWALVILYTAMNLPIAVWMMRSFFLEVP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AELLEAASLDGASLWRSVREVILPLVSPGIAATALICVIFAWNEFFFAVNLTAVNAQTMP
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCCC
VYLVGFIAGEGQYWAVLSAAATMAALPVIICGWLAQNKLVRGLSFGAIK
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTTVEETTPTTGSDITAKKKSRKFSVWGVLAWLVGLGFFFPVFWMILTSFKQEGDAATD
CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PPKLFFTPTLDQYGAVFDQGIGPAMLNSLFATGLSTILVLLLGTPAAFALSLRPVRKTQD
CCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHH
ALFFFMSTKMLPIVAVILPLYVIVSNIGLLDNIWALVILYTAMNLPIAVWMMRSFFLEVP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AELLEAASLDGASLWRSVREVILPLVSPGIAATALICVIFAWNEFFFAVNLTAVNAQTMP
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCCC
VYLVGFIAGEGQYWAVLSAAATMAALPVIICGWLAQNKLVRGLSFGAIK
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]