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The map label for this gene is bioC [C]

Identifier: 108801175

GI number: 108801175

Start: 4470609

End: 4471361

Strand: Reverse

Name: bioC [C]

Synonym: Mmcs_4211

Alternate gene names: 108801175

Gene position: 4471361-4470609 (Counterclockwise)

Preceding gene: 108801177

Following gene: 108801174

Centisome position: 78.37

GC content: 64.94

Gene sequence:

>753_bases
ATGACTGATGACATGTGGGGGACAGGGGACTATCGAGCAGTAGCAGAGAAGGTGACGTCCATCGCCGACGTGCTGGTCCG
GCGGGCGGGCATCGAAGCCGGGATGGCCGTGCTTGACGTCGCGTGCGGCACCGGCAACGCATCGATCCCTGCGGCCAAGT
TGGGGGCGCGAGTATGCGGCTTGGACTTCTCGCCGGGCCTGATCGCGATTGCACGGCAATGCGGCGCCGACGCCAACGTG
GAGATCGACTGGCGGGTAGGCGATGCCCAGTCCCTTCCATTCGAGGACGACAGCTTCGACCGGGTCATCTCCGCGATCGG
ACACATGTTCGCGCCCGACCACAAGCGCACCGCGGATGAACTGCTCCGTGTCTGCCGGCCCGAGGGTCGCATTGCGGTCG
CCTGCTGGACGCCGCAGGGCGCCATCGGCGAGATGTTCAAGCGCCTAGGCGCGATTTCTCCCGCGCCGCCGGAGGGCTTC
CAGCCACCGGTGCTGTGGGGCACCGAAGAGCATGTGCGTGAGTTGCTCGGTGAATCAGTCGAATTCGAGCGGCACAACGT
CGATTTCGACGAACCCTCGCCCGAGAGCTATGTCGATTTCATGCTGGCAAGCTTCCCTCCGTTGATCGCCATGCGAGCCC
AACTCGGCGACGAACTGGTGCGCGAGACCTACCTCGGTTGGGCCACCGATGTGAATGAGGCCGACGACGGGAGCCTGCGC
TTCCGCGGCGAGTACTTGGTGTCGGTCACCTGA

Upstream 100 bases:

>100_bases
AGCCGTGCGCCGAAATCTCCGCGACGGTGTTCCGGTCCTCCAGCCGTACCGATGCAAGAGCCCCTTCCCTGTCGGCCGGA
ATCGGCGGACGCTGATGGTC

Downstream 100 bases:

>100_bases
CGACACCTAGACTTCCGAGAATGCGAGTCCCTCGACGAATCGCAGAGTTCAACAAGCGAGTCACCAATCCGGTGGCTCGC
ACGATCACCCCGTGGCTTCC

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTDDMWGTGDYRAVAEKVTSIADVLVRRAGIEAGMAVLDVACGTGNASIPAAKLGARVCGLDFSPGLIAIARQCGADANV
EIDWRVGDAQSLPFEDDSFDRVISAIGHMFAPDHKRTADELLRVCRPEGRIAVACWTPQGAIGEMFKRLGAISPAPPEGF
QPPVLWGTEEHVRELLGESVEFERHNVDFDEPSPESYVDFMLASFPPLIAMRAQLGDELVRETYLGWATDVNEADDGSLR
FRGEYLVSVT

Sequences:

>Translated_250_residues
MTDDMWGTGDYRAVAEKVTSIADVLVRRAGIEAGMAVLDVACGTGNASIPAAKLGARVCGLDFSPGLIAIARQCGADANV
EIDWRVGDAQSLPFEDDSFDRVISAIGHMFAPDHKRTADELLRVCRPEGRIAVACWTPQGAIGEMFKRLGAISPAPPEGF
QPPVLWGTEEHVRELLGESVEFERHNVDFDEPSPESYVDFMLASFPPLIAMRAQLGDELVRETYLGWATDVNEADDGSLR
FRGEYLVSVT
>Mature_249_residues
TDDMWGTGDYRAVAEKVTSIADVLVRRAGIEAGMAVLDVACGTGNASIPAAKLGARVCGLDFSPGLIAIARQCGADANVE
IDWRVGDAQSLPFEDDSFDRVISAIGHMFAPDHKRTADELLRVCRPEGRIAVACWTPQGAIGEMFKRLGAISPAPPEGFQ
PPVLWGTEEHVRELLGESVEFERHNVDFDEPSPESYVDFMLASFPPLIAMRAQLGDELVRETYLGWATDVNEADDGSLRF
RGEYLVSVT

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1403c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27187; Mature: 27056

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDMWGTGDYRAVAEKVTSIADVLVRRAGIEAGMAVLDVACGTGNASIPAAKLGARVCG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHEECCCCCCCCCHHHHCCCCCC
LDFSPGLIAIARQCGADANVEIDWRVGDAQSLPFEDDSFDRVISAIGHMFAPDHKRTADE
CCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH
LLRVCRPEGRIAVACWTPQGAIGEMFKRLGAISPAPPEGFQPPVLWGTEEHVRELLGESV
HHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHCCCC
EFERHNVDFDEPSPESYVDFMLASFPPLIAMRAQLGDELVRETYLGWATDVNEADDGSLR
CCHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
FRGEYLVSVT
ECCEEEEEEC
>Mature Secondary Structure 
TDDMWGTGDYRAVAEKVTSIADVLVRRAGIEAGMAVLDVACGTGNASIPAAKLGARVCG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHEECCCCCCCCCHHHHCCCCCC
LDFSPGLIAIARQCGADANVEIDWRVGDAQSLPFEDDSFDRVISAIGHMFAPDHKRTADE
CCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH
LLRVCRPEGRIAVACWTPQGAIGEMFKRLGAISPAPPEGFQPPVLWGTEEHVRELLGESV
HHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHCCCC
EFERHNVDFDEPSPESYVDFMLASFPPLIAMRAQLGDELVRETYLGWATDVNEADDGSLR
CCHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
FRGEYLVSVT
ECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]