| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801152
Identifier: 108801152
GI number: 108801152
Start: 4452878
End: 4453567
Strand: Reverse
Name: 108801152
Synonym: Mmcs_4188
Alternate gene names: NA
Gene position: 4453567-4452878 (Counterclockwise)
Preceding gene: 108801153
Following gene: 108801151
Centisome position: 78.06
GC content: 70.72
Gene sequence:
>690_bases ATGGCCGCCGATCGAGCCCTGACCGCACACCGGCGCGAGATCCTTTCGCGACGCATCCGGTGGTTCGTCACGGCCACCAT CTCCTACAACATCGTCGAGGCGATCGTCGCGCTGGCCGAAGGCTCGCGGGTGTCGTCCTCGGCGCTGATCGGCTTCGGGC TGGACTCGGTCATCGAGGTGTCCTCGGCTGCGGCGGTGGCCTGGCAGTTCGCCGGCCGCGATCCCGAAGCGCGGGAGAAG GTAGCCCTGCGCGTCATCGCATTCTCTTTCTTCGCGCTCGCGGCGTTCGTGACGGTCGACGCCGTCCGCTCACTGTTCGG TATCGGTGAGGCCCGGCACTCGACGGTCGGCATCGTGCTGGCGGCCGTGAGCCTGGCGGTCATGCCGGTGCTGTCCTGGG CGCAGCGCCGGGCCGGCCGCGAGTTGGGGTCGCTGTCGGCGGTGGCCGACTCGAAGCAGACTTTGCTGTGCACCTATCTC TCGGCGGTGCTGCTGGCGGGGCTGGTGCTCAACAGCGCCTTCGGGTGGTCCTGGGCCGATTCGGTGGCCGCGCTGGTGAT CGCCGCCATCGCGGTCAAGGAGGGTCGCGAAGCCTGGCGCGGGGAGGCCTGCTGCGCCGCGCCACCGCGCGACGCCGCGA ACTGCTGCGAGGCCGAACGCGACGGGGCACCCGGCGAAACCGCCCTCTGA
Upstream 100 bases:
>100_bases GGATCGGCGCGGCGCTCGACGATCTGATGGGACTGGTGCTGGCGGTCGACCCGAACTGCTGTTGCACCGGTGACGACGGC GACGGATGCAGGTGCTGCTG
Downstream 100 bases:
>100_bases CGACGCCGAACTGTGCCACGATCCGTCTCGGCGACAGCCGCGAGACGGGGGTTCGACGATGGAACGCATTCCGATGTGGC TCGGGATCGGTGCGGTGGCC
Product: cation efflux protein
Products: NA
Alternate protein names: Integral Membrane Protein; Cation Efflux Family Protein; Co/Zn/Cd Cation Transporter-Like Protein; Co/Zn/Cd Cation Transporter; Co/Zn/Cd Cation Transporters-Like Protein; Conserved Membrane Protein; CoZn:Cd Cation Transporter
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MAADRALTAHRREILSRRIRWFVTATISYNIVEAIVALAEGSRVSSSALIGFGLDSVIEVSSAAAVAWQFAGRDPEAREK VALRVIAFSFFALAAFVTVDAVRSLFGIGEARHSTVGIVLAAVSLAVMPVLSWAQRRAGRELGSLSAVADSKQTLLCTYL SAVLLAGLVLNSAFGWSWADSVAALVIAAIAVKEGREAWRGEACCAAPPRDAANCCEAERDGAPGETAL
Sequences:
>Translated_229_residues MAADRALTAHRREILSRRIRWFVTATISYNIVEAIVALAEGSRVSSSALIGFGLDSVIEVSSAAAVAWQFAGRDPEAREK VALRVIAFSFFALAAFVTVDAVRSLFGIGEARHSTVGIVLAAVSLAVMPVLSWAQRRAGRELGSLSAVADSKQTLLCTYL SAVLLAGLVLNSAFGWSWADSVAALVIAAIAVKEGREAWRGEACCAAPPRDAANCCEAERDGAPGETAL >Mature_228_residues AADRALTAHRREILSRRIRWFVTATISYNIVEAIVALAEGSRVSSSALIGFGLDSVIEVSSAAAVAWQFAGRDPEAREKV ALRVIAFSFFALAAFVTVDAVRSLFGIGEARHSTVGIVLAAVSLAVMPVLSWAQRRAGRELGSLSAVADSKQTLLCTYLS AVLLAGLVLNSAFGWSWADSVAALVIAAIAVKEGREAWRGEACCAAPPRDAANCCEAERDGAPGETAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24093; Mature: 23962
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADRALTAHRREILSRRIRWFVTATISYNIVEAIVALAEGSRVSSSALIGFGLDSVIEV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHH SSAAAVAWQFAGRDPEAREKVALRVIAFSFFALAAFVTVDAVRSLFGIGEARHSTVGIVL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AAVSLAVMPVLSWAQRRAGRELGSLSAVADSKQTLLCTYLSAVLLAGLVLNSAFGWSWAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH SVAALVIAAIAVKEGREAWRGEACCAAPPRDAANCCEAERDGAPGETAL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AADRALTAHRREILSRRIRWFVTATISYNIVEAIVALAEGSRVSSSALIGFGLDSVIEV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHH SSAAAVAWQFAGRDPEAREKVALRVIAFSFFALAAFVTVDAVRSLFGIGEARHSTVGIVL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AAVSLAVMPVLSWAQRRAGRELGSLSAVADSKQTLLCTYLSAVLLAGLVLNSAFGWSWAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH SVAALVIAAIAVKEGREAWRGEACCAAPPRDAANCCEAERDGAPGETAL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA