| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is mshB [H]
Identifier: 108801106
GI number: 108801106
Start: 4408207
End: 4409079
Strand: Reverse
Name: mshB [H]
Synonym: Mmcs_4142
Alternate gene names: 108801106
Gene position: 4409079-4408207 (Counterclockwise)
Preceding gene: 108801110
Following gene: 108801105
Centisome position: 77.28
GC content: 67.7
Gene sequence:
>873_bases ATGAGTGAACTGCGCTTGATGGCGGTGCATGCGCACCCCGACGACGAGTCGAGCAAGGGTGCCGCCACCATGGCCAAATA CGCCGACGCGGGCGCCCGCGTGATGGTGGTGACGCTGACCGGTGGTGAGCGCGGCGACATCCTGAACCCGGCGATGGACA TTCCGGAGGTGCACGGCCGGATGGCCGAGATCCGGCGTGACGAGATGGCCAGGGCCGCCGAGATCCTCGGCGTCGAACAC CGCTGGCTCGGATTCGTCGACTCCGGACTGCCCGAGGGTGATCCGCTGCCGCCGCTGCCCGACGGCTGTTTCGCGCTGGC TCCCCTCGAGGAGTCCACCGAGGCGCTCGTGCGGGTCATCCGGGAGTTCAGGCCGCACGTGATGACGACCTACGACGAGA CGGGCGGTTATCCGCACCCGGACCACATCCGCTGCCACGAGGTGTCGGTGGCCGCGTACGAGGCGGCCGGCGACTACCTG CGGTACCCCGACGCGGGTGAGCCGTGGAACGTGTCGAAGCTGTACTACATCCACGGGTTCCTGCGGGATCGCATGCAGAC GCTGCAGGACGAGTTCGCCAAGCACGGGCTCGAAGGGCCGTTCGCGAAATGGCTCGAGCACTGGAACCCCGACCGCGACA TCTTCGCCAAGCGGGTGACCACCCGGGTGGAGTGCGCGAAGTACTTCCCGCAGCGTGACGATGCGCTGCGGGCACACGCC ACCCAGATCGACCCGAACAGCTTCTTCTTCGCGGCGCCGCTCGAGTGGCAGGAACGGCTCTGGCCGACGGAGGAGTTCGA ACTGGCCCGCTCACGCATTCCGGTCACCCTGCCCGAGACCGATCTCTTCGAGGGCGTCGAGGTGGACCGATGA
Upstream 100 bases:
>100_bases CTGAGACTATAGAGCGCAACGGGTGCGACCTCGAAGACGAGCCCGGGCCCGAAACTGCCCGGGGCATAGTCGCGACGATG CCGTAGTTAGATGAGATGAG
Downstream 100 bases:
>100_bases TCGAGACGGTGTTGCTGGCGACGGAATGGCTGGCCCAGGAGCAGCCCCGCGAGACCGGCCCGGACTTCGGCAAGGCCAGC CCGTTCGGTCTGCTCATCGT
Product: LmbE-like protein
Products: NA
Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSELRLMAVHAHPDDESSKGAATMAKYADAGARVMVVTLTGGERGDILNPAMDIPEVHGRMAEIRRDEMARAAEILGVEH RWLGFVDSGLPEGDPLPPLPDGCFALAPLEESTEALVRVIREFRPHVMTTYDETGGYPHPDHIRCHEVSVAAYEAAGDYL RYPDAGEPWNVSKLYYIHGFLRDRMQTLQDEFAKHGLEGPFAKWLEHWNPDRDIFAKRVTTRVECAKYFPQRDDALRAHA TQIDPNSFFFAAPLEWQERLWPTEEFELARSRIPVTLPETDLFEGVEVDR
Sequences:
>Translated_290_residues MSELRLMAVHAHPDDESSKGAATMAKYADAGARVMVVTLTGGERGDILNPAMDIPEVHGRMAEIRRDEMARAAEILGVEH RWLGFVDSGLPEGDPLPPLPDGCFALAPLEESTEALVRVIREFRPHVMTTYDETGGYPHPDHIRCHEVSVAAYEAAGDYL RYPDAGEPWNVSKLYYIHGFLRDRMQTLQDEFAKHGLEGPFAKWLEHWNPDRDIFAKRVTTRVECAKYFPQRDDALRAHA TQIDPNSFFFAAPLEWQERLWPTEEFELARSRIPVTLPETDLFEGVEVDR >Mature_289_residues SELRLMAVHAHPDDESSKGAATMAKYADAGARVMVVTLTGGERGDILNPAMDIPEVHGRMAEIRRDEMARAAEILGVEHR WLGFVDSGLPEGDPLPPLPDGCFALAPLEESTEALVRVIREFRPHVMTTYDETGGYPHPDHIRCHEVSVAAYEAAGDYLR YPDAGEPWNVSKLYYIHGFLRDRMQTLQDEFAKHGLEGPFAKWLEHWNPDRDIFAKRVTTRVECAKYFPQRDDALRAHAT QIDPNSFFFAAPLEWQERLWPTEEFELARSRIPVTLPETDLFEGVEVDR
Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway [H]
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MshB deacetylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003737 - InterPro: IPR017810 [H]
Pfam domain/function: PF02585 PIG-L [H]
EC number: =3.5.1.103 [H]
Molecular weight: Translated: 32927; Mature: 32796
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELRLMAVHAHPDDESSKGAATMAKYADAGARVMVVTLTGGERGDILNPAMDIPEVHGR CCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHH MAEIRRDEMARAAEILGVEHRWLGFVDSGLPEGDPLPPLPDGCFALAPLEESTEALVRVI HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHH REFRPHVMTTYDETGGYPHPDHIRCHEVSVAAYEAAGDYLRYPDAGEPWNVSKLYYIHGF HHHCCCEEEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH LRDRMQTLQDEFAKHGLEGPFAKWLEHWNPDRDIFAKRVTTRVECAKYFPQRDDALRAHA HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TQIDPNSFFFAAPLEWQERLWPTEEFELARSRIPVTLPETDLFEGVEVDR EEECCCCEEEECCCCHHHHCCCCHHHHHHHHCCCEECCCCHHHCCCCCCC >Mature Secondary Structure SELRLMAVHAHPDDESSKGAATMAKYADAGARVMVVTLTGGERGDILNPAMDIPEVHGR CCEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHH MAEIRRDEMARAAEILGVEHRWLGFVDSGLPEGDPLPPLPDGCFALAPLEESTEALVRVI HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHH REFRPHVMTTYDETGGYPHPDHIRCHEVSVAAYEAAGDYLRYPDAGEPWNVSKLYYIHGF HHHCCCEEEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH LRDRMQTLQDEFAKHGLEGPFAKWLEHWNPDRDIFAKRVTTRVECAKYFPQRDDALRAHA HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TQIDPNSFFFAAPLEWQERLWPTEEFELARSRIPVTLPETDLFEGVEVDR EEECCCCEEEECCCCHHHHCCCCHHHHHHHHCCCEECCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA