| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801096
Identifier: 108801096
GI number: 108801096
Start: 4399232
End: 4400509
Strand: Reverse
Name: 108801096
Synonym: Mmcs_4132
Alternate gene names: NA
Gene position: 4400509-4399232 (Counterclockwise)
Preceding gene: 108801098
Following gene: 108801095
Centisome position: 77.13
GC content: 71.13
Gene sequence:
>1278_bases GTGAACGCCTGGGGCGAGGAGATTAGCGTTGCGGGCATGGAGCCCGACACCCTGATCCGCGAATATCTGCTCCTCGGTCT GCGCTTCGACCGCGTCGAGGACGGCTACGTCGACTCCTTCACCGGTGACCCCGCGCTGCGGGGCGCGGTGGCCGACGAGC CCGCACCCGACCCCGCCGATCTCGCCCGCCAGGCCGACCGGCTGCTGGCCGCGGTGCCCGACACCCCGCGTACCGGCGGA TTCGACGAGGCGCGCGCCGACTACCTGGCCGCGCACCTGCGGGCGCTGGCGCTGGCGGGCCGGAAGTTCGCCGGTGAGGA CGTCGGGTTCGTCGACGAAGTCGAGGCGTACTTCGACGTGCGGATCACCAAGGGCGATCCGGAGGCCTATCGGCAGGCGC ATGTCGCGCTGGACGAGGCGCTCGGCGGCAGTGGACCGCTGGCCGAGCGGATCCAGGCGCACCGCACCGCCGACGAGATC CCGCCCGAGCGTCTCGAGGAGTGCATCCACGCGTTCTCCAGCGCGCTGCGCGACCGGGTGCGGGCGACGTATCCGCTGCC CGACACCGAGACCATCACCTACGAGGTCGTCACCGACAAACCGTGGTCGGGGTTCAACTACTACCTGGGCAACTACCGGT CGACGGTCGCGGTGAACGCCGACCTCAAACAGCAGATGGCCAACCTGCCGCGTCTGGTCGCCCACGAGTCGTATCCGGGT CACCACACCGAGCACTGCCGCAAGGAATTCGGGCTGGTCGACGGTAAGGGCCAGGCCGAGCAGACGATCTTCCTGGTCAA CACGCCGCAGTGCCTGATGGCCGAGGGGCTGGCGGATCTGGCGCTGTACGCGGCGATGGGGGACAGGGCGAGCGAAGCGA CGGGGGATGGGCACGGCTGGGGGAGCTGGGCCGCGGAGATCTACGCCGACCTCGGGCTGCGGTTCGACGGCGCGCGCGCC GAGGCGGTGTCGGCGGCGACGACGGCGCTGGCCGACGTGCGTCAGGACGCGGCGATCATGCTGCACGACGAACACCGCTC GGTCGACGACGTCGTGGCGTTCCTCAAGCGGTGGCTGCTGGTCGACGACGACCGGGCGCGGCAGATGCTGCGGTTCCTGT CGTCGCCGCTGTGGCGGGCGTACACGAGCACCTACGTCGAGGGGTACCGCCTGCTGCGGGGATGGCTCGACGCGCGGCCC GCCGGGGTCGGGCTGACCGAGCGGTTCGGCCGGCTGCTCGACGAGCCGTTGATCCCGTCGGCGTTGCGCGTGGCCTGA
Upstream 100 bases:
>100_bases GACATCCGGAGCGCACGCCACTGGGTGCGGTCGAACTCCACGTAGGGGCTCGGTTCGCTCAGCCGCGCCATGGGATCAGT CTTGCAGTACGGGCTCCGGG
Downstream 100 bases:
>100_bases GCTTCGCCGAGCGTGCGATTTCATCCGCGACACGCGGGGTGGGGCGTATCAGTTCGCACACTCGGCGCAGATGGCGGGCG ATTTCTGCCCCGGCGCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MNAWGEEISVAGMEPDTLIREYLLLGLRFDRVEDGYVDSFTGDPALRGAVADEPAPDPADLARQADRLLAAVPDTPRTGG FDEARADYLAAHLRALALAGRKFAGEDVGFVDEVEAYFDVRITKGDPEAYRQAHVALDEALGGSGPLAERIQAHRTADEI PPERLEECIHAFSSALRDRVRATYPLPDTETITYEVVTDKPWSGFNYYLGNYRSTVAVNADLKQQMANLPRLVAHESYPG HHTEHCRKEFGLVDGKGQAEQTIFLVNTPQCLMAEGLADLALYAAMGDRASEATGDGHGWGSWAAEIYADLGLRFDGARA EAVSAATTALADVRQDAAIMLHDEHRSVDDVVAFLKRWLLVDDDRARQMLRFLSSPLWRAYTSTYVEGYRLLRGWLDARP AGVGLTERFGRLLDEPLIPSALRVA
Sequences:
>Translated_425_residues MNAWGEEISVAGMEPDTLIREYLLLGLRFDRVEDGYVDSFTGDPALRGAVADEPAPDPADLARQADRLLAAVPDTPRTGG FDEARADYLAAHLRALALAGRKFAGEDVGFVDEVEAYFDVRITKGDPEAYRQAHVALDEALGGSGPLAERIQAHRTADEI PPERLEECIHAFSSALRDRVRATYPLPDTETITYEVVTDKPWSGFNYYLGNYRSTVAVNADLKQQMANLPRLVAHESYPG HHTEHCRKEFGLVDGKGQAEQTIFLVNTPQCLMAEGLADLALYAAMGDRASEATGDGHGWGSWAAEIYADLGLRFDGARA EAVSAATTALADVRQDAAIMLHDEHRSVDDVVAFLKRWLLVDDDRARQMLRFLSSPLWRAYTSTYVEGYRLLRGWLDARP AGVGLTERFGRLLDEPLIPSALRVA >Mature_425_residues MNAWGEEISVAGMEPDTLIREYLLLGLRFDRVEDGYVDSFTGDPALRGAVADEPAPDPADLARQADRLLAAVPDTPRTGG FDEARADYLAAHLRALALAGRKFAGEDVGFVDEVEAYFDVRITKGDPEAYRQAHVALDEALGGSGPLAERIQAHRTADEI PPERLEECIHAFSSALRDRVRATYPLPDTETITYEVVTDKPWSGFNYYLGNYRSTVAVNADLKQQMANLPRLVAHESYPG HHTEHCRKEFGLVDGKGQAEQTIFLVNTPQCLMAEGLADLALYAAMGDRASEATGDGHGWGSWAAEIYADLGLRFDGARA EAVSAATTALADVRQDAAIMLHDEHRSVDDVVAFLKRWLLVDDDRARQMLRFLSSPLWRAYTSTYVEGYRLLRGWLDARP AGVGLTERFGRLLDEPLIPSALRVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46819; Mature: 46819
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAWGEEISVAGMEPDTLIREYLLLGLRFDRVEDGYVDSFTGDPALRGAVADEPAPDPAD CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHH LARQADRLLAAVPDTPRTGGFDEARADYLAAHLRALALAGRKFAGEDVGFVDEVEAYFDV HHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEE RITKGDPEAYRQAHVALDEALGGSGPLAERIQAHRTADEIPPERLEECIHAFSSALRDRV EEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHH RATYPLPDTETITYEVVTDKPWSGFNYYLGNYRSTVAVNADLKQQMANLPRLVAHESYPG HCCCCCCCCCEEEEEEEECCCCCCCHHHHCCCCEEEEECHHHHHHHHCCCHHHHCCCCCC HHTEHCRKEFGLVDGKGQAEQTIFLVNTPQCLMAEGLADLALYAAMGDRASEATGDGHGW CCHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH GSWAAEIYADLGLRFDGARAEAVSAATTALADVRQDAAIMLHDEHRSVDDVVAFLKRWLL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHC VDDDRARQMLRFLSSPLWRAYTSTYVEGYRLLRGWLDARPAGVGLTERFGRLLDEPLIPS CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCH ALRVA HHHCC >Mature Secondary Structure MNAWGEEISVAGMEPDTLIREYLLLGLRFDRVEDGYVDSFTGDPALRGAVADEPAPDPAD CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHH LARQADRLLAAVPDTPRTGGFDEARADYLAAHLRALALAGRKFAGEDVGFVDEVEAYFDV HHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEE RITKGDPEAYRQAHVALDEALGGSGPLAERIQAHRTADEIPPERLEECIHAFSSALRDRV EEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHH RATYPLPDTETITYEVVTDKPWSGFNYYLGNYRSTVAVNADLKQQMANLPRLVAHESYPG HCCCCCCCCCEEEEEEEECCCCCCCHHHHCCCCEEEEECHHHHHHHHCCCHHHHCCCCCC HHTEHCRKEFGLVDGKGQAEQTIFLVNTPQCLMAEGLADLALYAAMGDRASEATGDGHGW CCHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH GSWAAEIYADLGLRFDGARAEAVSAATTALADVRQDAAIMLHDEHRSVDDVVAFLKRWLL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHC VDDDRARQMLRFLSSPLWRAYTSTYVEGYRLLRGWLDARPAGVGLTERFGRLLDEPLIPS CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCH ALRVA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA