| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800908
Identifier: 108800908
GI number: 108800908
Start: 4204697
End: 4205599
Strand: Reverse
Name: 108800908
Synonym: Mmcs_3944
Alternate gene names: NA
Gene position: 4205599-4204697 (Counterclockwise)
Preceding gene: 108800913
Following gene: 108800907
Centisome position: 73.71
GC content: 68.99
Gene sequence:
>903_bases GTGGCAGTGTTGGGTTTCGTGAGCGGACCCCGTGGCGGCATCGCCGCCGTCGTGTGTGCGGTTGCGCTGGTTTGTGCCGG GTGTTCCGCCGATCCGGAGCCGTCCGGCCCGCCTGCGCCCGGGCAGACGTACCCGAACTGGCCGGCGACGCTCGACAGCT TCCGGTTCCGGTGGACGGCGGAGCCGGGAATCGACCTCCTCACCGGTGCGGCGGTTCCGATCCGGGCCTATCTGGAGGGG CGGCGGGTCGCCGAATTCACGGCTGGGACAGGCAGTTCCCTGCCGACGCAGTTCGAGTCCTATCCGGGGTTCGGCAGCAC CGTGAAGCGACCCACCGGCCTCCCGTGGAAAGGGCCGGATCCGGTGGAGGTCTGGGACGCCTATCCGGACGCGAGGATCG ACATCGCGGGAAAGCAGTTGTTCGGCAACGAGTATTTCCACCTGCTGCAACTCGACCCGATCGACGGGGGCTACCGCGCG TACGTCTGCGACGGGCGCTACAACCTCTTCGTCAAGAAGGCGAAGGGCAACGCGTATGAGACGACCGAGGGCGTGGGCTT CGGGAAATTCGACTACATCTTCGTGTGGCGGGTGGAAGTGCGCAACCACAGGGAGCTGCCGGAGCGTGGGCCGCAGCGCG GCCCGAACCCGGCGCCCGCCGACGACGTCTTCGACGGCGCGCAGATTCTGGCCGGCAACAAGGCGCGGTGGGGAGGCTTC GAGGGGGTGCCGAACACCGGCGCTGACCCGAGCGAATCCCGGACCAGCGCCGAGAATCATCGCCGCTGCCTCGACAAGAT GCCGGACTCCCCGCACGACATGGGGATCATCGCCGCATCGAGACCGACCGAACCGCCCGCGTTCGAACCCGCCGTGCCGG GGTGGCCCGCCCAGGCCGGCTGA
Upstream 100 bases:
>100_bases CGGGATCGGGCAGCCATTGACCGGTCATCGAATCACTCCATTTCGCCCTGAGAATCGCTGTGCTCGACCCTAAATCAGTG CACCGACCGACACGCGGGGC
Downstream 100 bases:
>100_bases GCGTGTTCACCCATGGTGAACACTCCACCACCTGCTGTGCAACGGTGTAATCATGTAATCATGAAGACACATCATCATCG CCGACCCGGACGGGCAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAVLGFVSGPRGGIAAVVCAVALVCAGCSADPEPSGPPAPGQTYPNWPATLDSFRFRWTAEPGIDLLTGAAVPIRAYLEG RRVAEFTAGTGSSLPTQFESYPGFGSTVKRPTGLPWKGPDPVEVWDAYPDARIDIAGKQLFGNEYFHLLQLDPIDGGYRA YVCDGRYNLFVKKAKGNAYETTEGVGFGKFDYIFVWRVEVRNHRELPERGPQRGPNPAPADDVFDGAQILAGNKARWGGF EGVPNTGADPSESRTSAENHRRCLDKMPDSPHDMGIIAASRPTEPPAFEPAVPGWPAQAG
Sequences:
>Translated_300_residues MAVLGFVSGPRGGIAAVVCAVALVCAGCSADPEPSGPPAPGQTYPNWPATLDSFRFRWTAEPGIDLLTGAAVPIRAYLEG RRVAEFTAGTGSSLPTQFESYPGFGSTVKRPTGLPWKGPDPVEVWDAYPDARIDIAGKQLFGNEYFHLLQLDPIDGGYRA YVCDGRYNLFVKKAKGNAYETTEGVGFGKFDYIFVWRVEVRNHRELPERGPQRGPNPAPADDVFDGAQILAGNKARWGGF EGVPNTGADPSESRTSAENHRRCLDKMPDSPHDMGIIAASRPTEPPAFEPAVPGWPAQAG >Mature_299_residues AVLGFVSGPRGGIAAVVCAVALVCAGCSADPEPSGPPAPGQTYPNWPATLDSFRFRWTAEPGIDLLTGAAVPIRAYLEGR RVAEFTAGTGSSLPTQFESYPGFGSTVKRPTGLPWKGPDPVEVWDAYPDARIDIAGKQLFGNEYFHLLQLDPIDGGYRAY VCDGRYNLFVKKAKGNAYETTEGVGFGKFDYIFVWRVEVRNHRELPERGPQRGPNPAPADDVFDGAQILAGNKARWGGFE GVPNTGADPSESRTSAENHRRCLDKMPDSPHDMGIIAASRPTEPPAFEPAVPGWPAQAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32234; Mature: 32103
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLGFVSGPRGGIAAVVCAVALVCAGCSADPEPSGPPAPGQTYPNWPATLDSFRFRWTA CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC EPGIDLLTGAAVPIRAYLEGRRVAEFTAGTGSSLPTQFESYPGFGSTVKRPTGLPWKGPD CCCCCEECCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC PVEVWDAYPDARIDIAGKQLFGNEYFHLLQLDPIDGGYRAYVCDGRYNLFVKKAKGNAYE CHHHHCCCCCCEEEECCHHHHCCCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCC TTEGVGFGKFDYIFVWRVEVRNHRELPERGPQRGPNPAPADDVFDGAQILAGNKARWGGF CCCCCCCCCEEEEEEEEEEECCCCCCHHCCCCCCCCCCCHHHHHCCCCEEECCCCCCCCC EGVPNTGADPSESRTSAENHRRCLDKMPDSPHDMGIIAASRPTEPPAFEPAVPGWPAQAG CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AVLGFVSGPRGGIAAVVCAVALVCAGCSADPEPSGPPAPGQTYPNWPATLDSFRFRWTA EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC EPGIDLLTGAAVPIRAYLEGRRVAEFTAGTGSSLPTQFESYPGFGSTVKRPTGLPWKGPD CCCCCEECCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC PVEVWDAYPDARIDIAGKQLFGNEYFHLLQLDPIDGGYRAYVCDGRYNLFVKKAKGNAYE CHHHHCCCCCCEEEECCHHHHCCCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCC TTEGVGFGKFDYIFVWRVEVRNHRELPERGPQRGPNPAPADDVFDGAQILAGNKARWGGF CCCCCCCCCEEEEEEEEEEECCCCCCHHCCCCCCCCCCCHHHHHCCCCEEECCCCCCCCC EGVPNTGADPSESRTSAENHRRCLDKMPDSPHDMGIIAASRPTEPPAFEPAVPGWPAQAG CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA