| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800897
Identifier: 108800897
GI number: 108800897
Start: 4190803
End: 4191372
Strand: Reverse
Name: 108800897
Synonym: Mmcs_3933
Alternate gene names: NA
Gene position: 4191372-4190803 (Counterclockwise)
Preceding gene: 108800898
Following gene: 108800890
Centisome position: 73.46
GC content: 68.6
Gene sequence:
>570_bases GTGTCATCAGGAGACAAGGTGTCATCAGGAGACAACGCTTCGCCGGGAGACAACGGTGCCCCGCTGCAACAGCGCGTCAC CGATCTGCTCGCGACGGTCGGAGCGGCGCTGGGAGATTTGGCGCAGAAGGCGCGTGACGCGGTGGAGGGAGCGGCCGGTC GCGTCGGTATCGGATCGTCGTCGGACGACGCGGGCGGCCCGGCCGCCTTGCCGTCCGGTGCGAAAGCCGCGACGGGTTCC GGGCGGGCGGCGCCGATCGAAGTTCCGGCGAAGAAGACCCCGGCCAAGAAGACGGCTGCGAAGACGGCTCCCGCGAAGAA GACGGCGCCCGCAAAGAAGGCTCCCGTAAAGAAGGCTCCCGTGAAGAAGACGGCGGTGAAGGCGACTCCGGCGAAGACCG AAGCCGCCAACATGGCGCCCGTCAAGAAGACCCCCGCGAAGAAGACCCCCGCGAAGAAGGCGGTCGAACCGGCCAAGGCC GCCGCCGCCAAGAAGACCCCGGCCAAGAAGACCCCGGCCAAGAAGGCGCCTGCCAAGAAGGCGGTCAAGCGCCCCGGCAA CCCCACCTGA
Upstream 100 bases:
>100_bases CGTTTTTCGCCCTCTCGACGCATGCCGTTGCGCGCGATACGTGAGGTATTCGCGAAAACGGGTATGGGGCCATGAGTCAT ACGTGAAACGGGAGGCCAAG
Downstream 100 bases:
>100_bases GAGCGCGAAGCCCTCAGAAGTATGCGTTGGCGGGAACCGGCGTGCCGTGTAGCAGGTTCTCGCCGACCACCCGCGCCTTG TACGCGACCGGATTGTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSSGDKVSSGDNASPGDNGAPLQQRVTDLLATVGAALGDLAQKARDAVEGAAGRVGIGSSSDDAGGPAALPSGAKAATGS GRAAPIEVPAKKTPAKKTAAKTAPAKKTAPAKKAPVKKAPVKKTAVKATPAKTEAANMAPVKKTPAKKTPAKKAVEPAKA AAAKKTPAKKTPAKKAPAKKAVKRPGNPT
Sequences:
>Translated_189_residues MSSGDKVSSGDNASPGDNGAPLQQRVTDLLATVGAALGDLAQKARDAVEGAAGRVGIGSSSDDAGGPAALPSGAKAATGS GRAAPIEVPAKKTPAKKTAAKTAPAKKTAPAKKAPVKKAPVKKTAVKATPAKTEAANMAPVKKTPAKKTPAKKAVEPAKA AAAKKTPAKKTPAKKAPAKKAVKRPGNPT >Mature_188_residues SSGDKVSSGDNASPGDNGAPLQQRVTDLLATVGAALGDLAQKARDAVEGAAGRVGIGSSSDDAGGPAALPSGAKAATGSG RAAPIEVPAKKTPAKKTAAKTAPAKKTAPAKKAPVKKAPVKKTAVKATPAKTEAANMAPVKKTPAKKTPAKKAVEPAKAA AAKKTPAKKTPAKKAPAKKAVKRPGNPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18472; Mature: 18341
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGDKVSSGDNASPGDNGAPLQQRVTDLLATVGAALGDLAQKARDAVEGAAGRVGIGSS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SDDAGGPAALPSGAKAATGSGRAAPIEVPAKKTPAKKTAAKTAPAKKTAPAKKAPVKKAP CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC VKKTAVKATPAKTEAANMAPVKKTPAKKTPAKKAVEPAKAAAAKKTPAKKTPAKKAPAKK CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH AVKRPGNPT HHCCCCCCC >Mature Secondary Structure SSGDKVSSGDNASPGDNGAPLQQRVTDLLATVGAALGDLAQKARDAVEGAAGRVGIGSS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SDDAGGPAALPSGAKAATGSGRAAPIEVPAKKTPAKKTAAKTAPAKKTAPAKKAPVKKAP CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC VKKTAVKATPAKTEAANMAPVKKTPAKKTPAKKAVEPAKAAAAKKTPAKKTPAKKAPAKK CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH AVKRPGNPT HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA