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The map label for this gene is yrbE [H]

Identifier: 108800868

GI number: 108800868

Start: 4158819

End: 4159793

Strand: Reverse

Name: yrbE [H]

Synonym: Mmcs_3904

Alternate gene names: 108800868

Gene position: 4159793-4158819 (Counterclockwise)

Preceding gene: 108800870

Following gene: 108800867

Centisome position: 72.91

GC content: 72.21

Gene sequence:

>975_bases
ATGGGTCGCTGCAGAGTCGCGTTCGTCGGAGCCGGCGGTGTCGCCGTCCGCCATGCCCGTCACCTCGCCGAACTGCCCGA
CGTGACCATCGCCTCGGTCACCGATCCCGCGGGCCCTGCCGCCGACGCGTTCGCGCGGGCCACCGGCGCGGCGGTGGTCC
CCGACCTTCCCGCACTCCTGGCCGACCCGCCGGATGCCGTCTACGTCTGCGTTCCGCCGCATGCGCACGGTCCGATCGAG
GAGTCGCTCGTCGAGGCGGGCGTCGCGTTGTTCGTCGAGAAACCGTTGGGTACCGACCCGGGCACCGCCCGGCGTATCGC
CGGTCTGATCGGCGAGCGTGGTGTCACCAGCGCCGTCGGCCACCACTGGCGGTATTCGGCGGCCGTTGGGTTGGTACGGG
ACATGTTGGGCGACAGCGTCGTTCGGCTCGCCGTCGCGTCGTGGCTGGATCGGGTGCCGCCGGTGGCGTGGTGGTGCCGA
CGGGACCTGTCGGGCGGGCAGATCGTCGAGCAGGCGGTGCACGTGCTCGACATGTTGCGGTACCTCGTCGGCGAGGTCGC
CGAGGTCAGCGCCTACGCCAACGCCGCCCCGCCGAGCGCGCCCGACGCCGACATCGACGGGGCGACCGCGGCGACCCTGC
GCTTCGCCTCGGGTGCGGTCGGTACGGTCGCCGCCGCCTGCTGCCTGACCTGGAAGCACCTCGCCGGTATCGACATCCAC
GCGGACGGGCTGAGTGTCGCGGTCCGCGAAGACGCGATCACGGCACGGACGGCCGACGGACCGCTGCAGCGCGACCTGGA
CCCCGACGACGCCAAGAGGGCCGCAGACCGCGCGTTCATCGACGCCGTGATGGACCGCGGGGCGGGCCGCGACGGAATCC
TCGTCGACTACGCCGACGCCCTGCGTACCCACGAACTGGCCTGTGCGATAGCGGAATCCGCACACCTGGCACGACCGGTG
GCGGTCCATGTCTGA

Upstream 100 bases:

>100_bases
CGACATGGCAGGCGAGTACCCGGGCCCTATCGACGTATGCGTCAGAACGTGCATACCGCCGCGAGTCGCGGGTATTCAGC
GCGAGCACCGGGAGGTTGGC

Downstream 100 bases:

>100_bases
CGCCGGTTACACCGTGGTCGTCGAGCGGCCCGGTGTGGTGACGTGCAGGGCGCAACCGTCGCAGGGCGCCCTGCCCGAGG
GGCAGTTCGACGTCGCCACC

Product: oxidoreductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MGRCRVAFVGAGGVAVRHARHLAELPDVTIASVTDPAGPAADAFARATGAAVVPDLPALLADPPDAVYVCVPPHAHGPIE
ESLVEAGVALFVEKPLGTDPGTARRIAGLIGERGVTSAVGHHWRYSAAVGLVRDMLGDSVVRLAVASWLDRVPPVAWWCR
RDLSGGQIVEQAVHVLDMLRYLVGEVAEVSAYANAAPPSAPDADIDGATAATLRFASGAVGTVAAACCLTWKHLAGIDIH
ADGLSVAVREDAITARTADGPLQRDLDPDDAKRAADRAFIDAVMDRGAGRDGILVDYADALRTHELACAIAESAHLARPV
AVHV

Sequences:

>Translated_324_residues
MGRCRVAFVGAGGVAVRHARHLAELPDVTIASVTDPAGPAADAFARATGAAVVPDLPALLADPPDAVYVCVPPHAHGPIE
ESLVEAGVALFVEKPLGTDPGTARRIAGLIGERGVTSAVGHHWRYSAAVGLVRDMLGDSVVRLAVASWLDRVPPVAWWCR
RDLSGGQIVEQAVHVLDMLRYLVGEVAEVSAYANAAPPSAPDADIDGATAATLRFASGAVGTVAAACCLTWKHLAGIDIH
ADGLSVAVREDAITARTADGPLQRDLDPDDAKRAADRAFIDAVMDRGAGRDGILVDYADALRTHELACAIAESAHLARPV
AVHV
>Mature_323_residues
GRCRVAFVGAGGVAVRHARHLAELPDVTIASVTDPAGPAADAFARATGAAVVPDLPALLADPPDAVYVCVPPHAHGPIEE
SLVEAGVALFVEKPLGTDPGTARRIAGLIGERGVTSAVGHHWRYSAAVGLVRDMLGDSVVRLAVASWLDRVPPVAWWCRR
DLSGGQIVEQAVHVLDMLRYLVGEVAEVSAYANAAPPSAPDADIDGATAATLRFASGAVGTVAAACCLTWKHLAGIDIHA
DGLSVAVREDAITARTADGPLQRDLDPDDAKRAADRAFIDAVMDRGAGRDGILVDYADALRTHELACAIAESAHLARPVA
VHV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=344, Percent_Identity=25, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33593; Mature: 33462

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRCRVAFVGAGGVAVRHARHLAELPDVTIASVTDPAGPAADAFARATGAAVVPDLPALL
CCCEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHH
ADPPDAVYVCVPPHAHGPIEESLVEAGVALFVEKPLGTDPGTARRIAGLIGERGVTSAVG
CCCCCEEEEEECCCCCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCCCHHHHHH
HHWRYSAAVGLVRDMLGDSVVRLAVASWLDRVPPVAWWCRRDLSGGQIVEQAVHVLDMLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
YLVGEVAEVSAYANAAPPSAPDADIDGATAATLRFASGAVGTVAAACCLTWKHLAGIDIH
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEE
ADGLSVAVREDAITARTADGPLQRDLDPDDAKRAADRAFIDAVMDRGAGRDGILVDYADA
CCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHH
LRTHELACAIAESAHLARPVAVHV
HHHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure 
GRCRVAFVGAGGVAVRHARHLAELPDVTIASVTDPAGPAADAFARATGAAVVPDLPALL
CCEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHH
ADPPDAVYVCVPPHAHGPIEESLVEAGVALFVEKPLGTDPGTARRIAGLIGERGVTSAVG
CCCCCEEEEEECCCCCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCCCHHHHHH
HHWRYSAAVGLVRDMLGDSVVRLAVASWLDRVPPVAWWCRRDLSGGQIVEQAVHVLDMLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
YLVGEVAEVSAYANAAPPSAPDADIDGATAATLRFASGAVGTVAAACCLTWKHLAGIDIH
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEE
ADGLSVAVREDAITARTADGPLQRDLDPDDAKRAADRAFIDAVMDRGAGRDGILVDYADA
CCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHH
LRTHELACAIAESAHLARPVAVHV
HHHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]