| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is ycjQ [C]
Identifier: 108800867
GI number: 108800867
Start: 4157732
End: 4158826
Strand: Reverse
Name: ycjQ [C]
Synonym: Mmcs_3903
Alternate gene names: 108800867
Gene position: 4158826-4157732 (Counterclockwise)
Preceding gene: 108800868
Following gene: 108800866
Centisome position: 72.89
GC content: 72.69
Gene sequence:
>1095_bases ATGTCTGACGCCGGTTACACCGTGGTCGTCGAGCGGCCCGGTGTGGTGACGTGCAGGGCGCAACCGTCGCAGGGCGCCCT GCCCGAGGGGCAGTTCGACGTCGCCACCGTGTTCAGCGGACTGTCCGCCGGGACGGACCTCAGCTGGGTCAAGGGCACGA ACCCGGCGCTGCACCAGAACTGGGATGCCGACCTCGGGTTGTTCCTGGCCGGCGAACCGAACGCCGGTTACCCCGTGGAG CGGTTCGGCTACATGCAGGTCGGCCGGGTGACGGCGAGCCGCGTGCCCTCGGTTGCCCCCGGGCGGCTGGTGGCGATGAC CTACGGCCACCGCAGCTGCTACCGCGCGGATGCGCTGCGCGACCGGTTCGTCGTACTGCCCGCCGGGTTCGACGCGGTGC TGGGCATCTACGTCGCCCACATGGGGCCGATCTGCGCCAACGGACTGCTGCACGCCGCCGCCGACGTGGTGGGCGCCGAT GTCCGGACCCTGGGAGACGGCGTACGCGGCAGGCGGGTGGCGGTCGTCGGCGCGGGGGTGGTGGGGCTGCTGACCGCGCT ACTGGCCGCCCACCACGGCGCGGCGGACGTGCTCGTGCTCGACGAGACCGCGGCGCGGCGCGACATCGCCGAACGGCTCG ACCTGGCGACGCTGGATCCGGGCGGCGGCGACCCGGCGGTCGCGGTCAAGCAGCGGTGGGGCCGATCCGGGGAGCGCGGC GCCGACGTGGTCTTCCAGTGCCGCGGGCGGGGCAGCGCGCTGGCCCTGGCCCTGCGGCTGCTGCGACCCCAGGGCACCGT CATCGACCTGGCCTTCTATCAGGACGGATGCGGTGACGTCCGGCTCGGCGAGGAATTCCACCACAACGGGCTGTCGGTGC GCTGCGCGCAGATCGGCCGGGTGCCGCGGGGTACGGCCGACCTGTGGGACCGCGACCGTCTGAGCGCGGAGACGGTCGAC TTCCTGCAGGCCCGCGGACGCGACATCAAGGCGCATCTGATCACCGACTACGCACCGCTGGTCGAGGCGCCGAGCACCTT GGGCCGCCTGGCGACCGGCCGGCACGACGGCCTCCAGATCGTTTTCTTTTGCTAA
Upstream 100 bases:
>100_bases CGCGACGGAATCCTCGTCGACTACGCCGACGCCCTGCGTACCCACGAACTGGCCTGTGCGATAGCGGAATCCGCACACCT GGCACGACCGGTGGCGGTCC
Downstream 100 bases:
>100_bases CGAACCGCCGCGTCGGCGCGATGAAGCTATCGGGGGGCTCATAAGCAGTATCGACTCATGGGCAGCACCGCTGCCGCCAG GCGATGAGGAGGTCGCGATG
Product: zinc-binding alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol Dehydrogenase
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSDAGYTVVVERPGVVTCRAQPSQGALPEGQFDVATVFSGLSAGTDLSWVKGTNPALHQNWDADLGLFLAGEPNAGYPVE RFGYMQVGRVTASRVPSVAPGRLVAMTYGHRSCYRADALRDRFVVLPAGFDAVLGIYVAHMGPICANGLLHAAADVVGAD VRTLGDGVRGRRVAVVGAGVVGLLTALLAAHHGAADVLVLDETAARRDIAERLDLATLDPGGGDPAVAVKQRWGRSGERG ADVVFQCRGRGSALALALRLLRPQGTVIDLAFYQDGCGDVRLGEEFHHNGLSVRCAQIGRVPRGTADLWDRDRLSAETVD FLQARGRDIKAHLITDYAPLVEAPSTLGRLATGRHDGLQIVFFC
Sequences:
>Translated_364_residues MSDAGYTVVVERPGVVTCRAQPSQGALPEGQFDVATVFSGLSAGTDLSWVKGTNPALHQNWDADLGLFLAGEPNAGYPVE RFGYMQVGRVTASRVPSVAPGRLVAMTYGHRSCYRADALRDRFVVLPAGFDAVLGIYVAHMGPICANGLLHAAADVVGAD VRTLGDGVRGRRVAVVGAGVVGLLTALLAAHHGAADVLVLDETAARRDIAERLDLATLDPGGGDPAVAVKQRWGRSGERG ADVVFQCRGRGSALALALRLLRPQGTVIDLAFYQDGCGDVRLGEEFHHNGLSVRCAQIGRVPRGTADLWDRDRLSAETVD FLQARGRDIKAHLITDYAPLVEAPSTLGRLATGRHDGLQIVFFC >Mature_363_residues SDAGYTVVVERPGVVTCRAQPSQGALPEGQFDVATVFSGLSAGTDLSWVKGTNPALHQNWDADLGLFLAGEPNAGYPVER FGYMQVGRVTASRVPSVAPGRLVAMTYGHRSCYRADALRDRFVVLPAGFDAVLGIYVAHMGPICANGLLHAAADVVGADV RTLGDGVRGRRVAVVGAGVVGLLTALLAAHHGAADVLVLDETAARRDIAERLDLATLDPGGGDPAVAVKQRWGRSGERGA DVVFQCRGRGSALALALRLLRPQGTVIDLAFYQDGCGDVRLGEEFHHNGLSVRCAQIGRVPRGTADLWDRDRLSAETVDF LQARGRDIKAHLITDYAPLVEAPSTLGRLATGRHDGLQIVFFC
Specific function: Unknown
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38566; Mature: 38435
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAGYTVVVERPGVVTCRAQPSQGALPEGQFDVATVFSGLSAGTDLSWVKGTNPALHQN CCCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCHHCCC WDADLGLFLAGEPNAGYPVERFGYMQVGRVTASRVPSVAPGRLVAMTYGHRSCYRADALR CCCCEEEEEECCCCCCCCHHHCCCEEECCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHC DRFVVLPAGFDAVLGIYVAHMGPICANGLLHAAADVVGADVRTLGDGVRGRRVAVVGAGV CCEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCH VGLLTALLAAHHGAADVLVLDETAARRDIAERLDLATLDPGGGDPAVAVKQRWGRSGERG HHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHCCCCCCCC ADVVFQCRGRGSALALALRLLRPQGTVIDLAFYQDGCGDVRLGEEFHHNGLSVRCAQIGR CCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCCCCEEEEHHHCC VPRGTADLWDRDRLSAETVDFLQARGRDIKAHLITDYAPLVEAPSTLGRLATGRHDGLQI CCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHCCCHHHHHHHCCCCCCEEE VFFC EEEC >Mature Secondary Structure SDAGYTVVVERPGVVTCRAQPSQGALPEGQFDVATVFSGLSAGTDLSWVKGTNPALHQN CCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCHHCCC WDADLGLFLAGEPNAGYPVERFGYMQVGRVTASRVPSVAPGRLVAMTYGHRSCYRADALR CCCCEEEEEECCCCCCCCHHHCCCEEECCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHC DRFVVLPAGFDAVLGIYVAHMGPICANGLLHAAADVVGADVRTLGDGVRGRRVAVVGAGV CCEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCH VGLLTALLAAHHGAADVLVLDETAARRDIAERLDLATLDPGGGDPAVAVKQRWGRSGERG HHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHCCCCCCCC ADVVFQCRGRGSALALALRLLRPQGTVIDLAFYQDGCGDVRLGEEFHHNGLSVRCAQIGR CCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCCCCEEEEHHHCC VPRGTADLWDRDRLSAETVDFLQARGRDIKAHLITDYAPLVEAPSTLGRLATGRHDGLQI CCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHCCCHHHHHHHCCCCCCEEE VFFC EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA