| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108800802
Identifier: 108800802
GI number: 108800802
Start: 4085221
End: 4085709
Strand: Reverse
Name: 108800802
Synonym: Mmcs_3838
Alternate gene names: NA
Gene position: 4085709-4085221 (Counterclockwise)
Preceding gene: 108800806
Following gene: 108800801
Centisome position: 71.61
GC content: 69.94
Gene sequence:
>489_bases GTGGGTTCGAGTCCCTCCGCCCGCACTCCATGTCACCGGACCAGGCACCATGGCCTGGTGACACTCCTCCGCCTGATCGC CCGGGTGCTTCTCGGCGCGTCCCTTCTCTTCGCGGGGATCGGTCACCTGACGTTCGCCCGCACCGACTTCTACGCCCAGG TTCCGCCCTGGCTGCCACTGGACGTCGACCTCGTGGTGATCGCCTCGGGTGTCGTGGAGATCGCGCTCGGCGTCGCGCTG ATCGTGCTGCATCGGTGGCGGGTCCCGCTCGGCTGGATCACCGCCGCGTTCTTCGTGCTGGTGTTCCCGGGCAACATCTC CCAGTGCCTCACCCACACCGATGCGTTCGGCCTCGACTCCGACCGCGACCGCGCTGTCCGACTGCTCTTCCAGCCGGTCC TCGTGGTCTGGGCGTTGTGGTCGACCGGCGCCTGGGCGGCCTGGCGCCGGCGCGCGTCGGCCGAGGAGGATCCGCATGTC CGGGCGTGA
Upstream 100 bases:
>100_bases ACCGACAGCTCGTAGCGTTCGGACGGTACGATGGCCACGCTGCGGGCGTGGCGAAACAGGTATACGCGCGGTCTTTAGGT GTCCGTGCTCGAAAGAGCGT
Downstream 100 bases:
>100_bases CCGCGACGAGGCCGGGCGGCCCCGCAACAGTCGCCCGCGTGATGCGCTCGGCCGGCCGCTGCCACCGGGGAGCGAAGGCG TCGACCGCATCCCCGACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGSSPSARTPCHRTRHHGLVTLLRLIARVLLGASLLFAGIGHLTFARTDFYAQVPPWLPLDVDLVVIASGVVEIALGVAL IVLHRWRVPLGWITAAFFVLVFPGNISQCLTHTDAFGLDSDRDRAVRLLFQPVLVVWALWSTGAWAAWRRRASAEEDPHV RA
Sequences:
>Translated_162_residues MGSSPSARTPCHRTRHHGLVTLLRLIARVLLGASLLFAGIGHLTFARTDFYAQVPPWLPLDVDLVVIASGVVEIALGVAL IVLHRWRVPLGWITAAFFVLVFPGNISQCLTHTDAFGLDSDRDRAVRLLFQPVLVVWALWSTGAWAAWRRRASAEEDPHV RA >Mature_161_residues GSSPSARTPCHRTRHHGLVTLLRLIARVLLGASLLFAGIGHLTFARTDFYAQVPPWLPLDVDLVVIASGVVEIALGVALI VLHRWRVPLGWITAAFFVLVFPGNISQCLTHTDAFGLDSDRDRAVRLLFQPVLVVWALWSTGAWAAWRRRASAEEDPHVR A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17905; Mature: 17774
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSPSARTPCHRTRHHGLVTLLRLIARVLLGASLLFAGIGHLTFARTDFYAQVPPWLPL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC DVDLVVIASGVVEIALGVALIVLHRWRVPLGWITAAFFVLVFPGNISQCLTHTDAFGLDS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC DRDRAVRLLFQPVLVVWALWSTGAWAAWRRRASAEEDPHVRA CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GSSPSARTPCHRTRHHGLVTLLRLIARVLLGASLLFAGIGHLTFARTDFYAQVPPWLPL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC DVDLVVIASGVVEIALGVALIVLHRWRVPLGWITAAFFVLVFPGNISQCLTHTDAFGLDS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC DRDRAVRLLFQPVLVVWALWSTGAWAAWRRRASAEEDPHVRA CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA