Click here to switch to the map view.

The map label for this gene is 108800743

Identifier: 108800743

GI number: 108800743

Start: 4031116

End: 4031430

Strand: Reverse

Name: 108800743

Synonym: Mmcs_3778

Alternate gene names: NA

Gene position: 4031430-4031116 (Counterclockwise)

Preceding gene: 108800744

Following gene: 108800742

Centisome position: 70.66

GC content: 64.44

Gene sequence:

>315_bases
GTGACCGACCTTGTGTCCCTCGTCCGGTATGCCACCGGCGTCGAGGACGAACTCGTCCCCTACGGTGACCGGGTGCGGGA
GAAGTACGCGGCGTGGCTGACGCAGCAGGAGCAGGCCGGGGTGACGTTCAGCGACACCGAGCGGTGGTGGCTGGACCGGA
TGGTGTCGGTGATCGCGAGCTCCGCCGGAATTCGGGTCGAAGATCTCGATGATGCGCCGTTCATCGAACGTGGTGGGACC
GACGGTGCGATCAGGGATTTGGGTGATCGGGCGGCGGAGTTGATTGATGAGTTGAATGCGGAGCTGACGGCGTGA

Upstream 100 bases:

>100_bases
GAGAATTGCTCGGCCGCCGCACAATTGGACGCCTGATCTACTCTGGAACGCCTATGCCGCGGTCGACGGCCCGAAGGTGC
ACAAGAGCGCCACCCATGCG

Downstream 100 bases:

>100_bases
GTTGGGCTCAGGAGGTAACGCTCGCTGAACTCGCCGAGGGCGGGCTGTTCTCTGATGGAGACTGGGTTGAATCGAAGGAT
CAAGATGCGAGCGGTGACGT

Product: type I site-specific deoxyribonuclease

Products: NA

Alternate protein names: Type III Restriction Res Subunit; Type I Restriction System Restriction Subunit; Type III Restriction; Type I Site-Specific Deoxyribonuclease

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTDLVSLVRYATGVEDELVPYGDRVREKYAAWLTQQEQAGVTFSDTERWWLDRMVSVIASSAGIRVEDLDDAPFIERGGT
DGAIRDLGDRAAELIDELNAELTA

Sequences:

>Translated_104_residues
MTDLVSLVRYATGVEDELVPYGDRVREKYAAWLTQQEQAGVTFSDTERWWLDRMVSVIASSAGIRVEDLDDAPFIERGGT
DGAIRDLGDRAAELIDELNAELTA
>Mature_103_residues
TDLVSLVRYATGVEDELVPYGDRVREKYAAWLTQQEQAGVTFSDTERWWLDRMVSVIASSAGIRVEDLDDAPFIERGGTD
GAIRDLGDRAAELIDELNAELTA

Specific function: Unknown

COG id: COG4096

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11564; Mature: 11433

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLVSLVRYATGVEDELVPYGDRVREKYAAWLTQQEQAGVTFSDTERWWLDRMVSVIAS
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
SAGIRVEDLDDAPFIERGGTDGAIRDLGDRAAELIDELNAELTA
CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDLVSLVRYATGVEDELVPYGDRVREKYAAWLTQQEQAGVTFSDTERWWLDRMVSVIAS
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
SAGIRVEDLDDAPFIERGGTDGAIRDLGDRAAELIDELNAELTA
CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA