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The map label for this gene is 108800548

Identifier: 108800548

GI number: 108800548

Start: 3816921

End: 3818312

Strand: Reverse

Name: 108800548

Synonym: Mmcs_3582

Alternate gene names: NA

Gene position: 3818312-3816921 (Counterclockwise)

Preceding gene: 108800549

Following gene: 108800546

Centisome position: 66.92

GC content: 68.32

Gene sequence:

>1392_bases
ATGGAGCCCGACAGGAATCCGCTGATCATCGGCGCCGGGCCCGCCGGTCTCACCGCTGCACTGCAACTGGTGAAGCGCGG
GGTCACGCCGCGGATCTACGAGGCGTCCGCGAACGTCGGCGGTCTGGCCCGCACCCCGCGGCGAGGTGACTGGCGCCTCG
ATCCCGGCGGGCACCGGTTCTTCACCAGAAGCGAAGCGGTCCTTGGCATCTGGAGGTCTCTGCTGCCCGCGGAGGAGTGG
GTCGCGGTGGCCCGGCGCTCCGCCATGCTGGTGCAGGGCCGCCGAGTCAGGTATCCGCTCATCGGCCGCGACCTGCTCAC
CCAGCTGGGGTTCCGCAGCGGGATTCACGGCCTCGGCGACCTGCTGCGGGCCAGGCTGATTCGCCGGAGGCGTCACGGTG
GCGCCTCCGAGAGCTTCGAAGACTGGGGCACACGCGAATTCGGGCGGCATTGGTACACCCTGTTCTTCGCCGGATACGTC
CGCAAGACCTGGCTCGCCGAGCCGGCCGACCTGACGAGTGATTGGGCGAACCAACGGATCCGGCCGATCCGATGGCGGAA
GGTCGACGCTTTCGCCGCGCGCGACGTCTTCCGGTATCCCCGCCTCGGGCCCGGGCAGCTCTGGGAGGCCGCGGCGGCGG
TGCTCGCCGACAGCGGTGTGGTCACGTCACTGGAGTCGCCGGTGGTGAAGGTGAGTCACCGCGGCGGGACGTGGATCGTC
ACACTGCAGAACGGCGACACCGCTTCCGGCGATGCGGTGTTCTCCAGCATGCCGCTCCGGTCCCTCGTCGAAGCCCTCGA
ACCCGCACCGCCCCAACATGTCCGGGCGGCCGCGGCAGCCCTGAGGCATCGCGCCCTGATCACCGTCGGCGTCGCCCTGC
GCGAGCGCGTCGACCTCCCGTACAACTGGATGTACACCCCGAGTGGGCACATGCGGGTGGGTCGCATCCAGAACTACACC
CGCTGGTCGCCGGATCTGGCCCCGGCACAGTGGGGCGGGACCTACCTCGGCCTGGAGTACTTCACCAACACCGACGGCGA
CCTCTGGCTGGCCGACGACGAGGGTATGACGAAGGTCGTCGAACAGGATCTACGCGCGCTGGGAGTTGCCGCGTCCGCGG
TCGAGAAGATCATGGTCGTCCGCTCGCAGTTCGCCTACCCGGTCTACGATTCCGAGCGCGAGAGAAGCGTCGCGGTGATC
CGCGACTTCCTGCGCCACCACCACCCATCGCTTCGGCCGATGGGGCGAAACGGTATGCATCACTACGACAACCAGGACCA
CGCGATGCTGAGCGCGATGCAGAGCGTCGCCCGCTATTTCGGTGACGACGCGGATCCGTGGCAGGTCAACACGGAGCTGC
GCTATCAGGAATCCGGACTGCTCAGGATGTGA

Upstream 100 bases:

>100_bases
ATGTTCCTGACCACTGCGCTCAACGATCTCCAACGCGCGGACATCGACGATCTGATCGCCGACTACCGACGCTTCCCGCA
GCGGCGTGGGCGGTGACGCC

Downstream 100 bases:

>100_bases
GCGAGGGGATCGCGTCGCCCCACAGACCGGCGCGCCACAGCGGCGACGCCTCACCCTCGTGGCGCCAGGTTGCGTTGATG
TACCAGTCGACCGGTCCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; UDP-Galactopyranose Mutase; Amine Oxidase Flavin-Containing Superfamily; Amine Oxidase Flavin-Containing; Flavin Containing Amine Oxidoreductase; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Protoporphyrinogen Oxidase-Like Protein; Oxidase

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MEPDRNPLIIGAGPAGLTAALQLVKRGVTPRIYEASANVGGLARTPRRGDWRLDPGGHRFFTRSEAVLGIWRSLLPAEEW
VAVARRSAMLVQGRRVRYPLIGRDLLTQLGFRSGIHGLGDLLRARLIRRRRHGGASESFEDWGTREFGRHWYTLFFAGYV
RKTWLAEPADLTSDWANQRIRPIRWRKVDAFAARDVFRYPRLGPGQLWEAAAAVLADSGVVTSLESPVVKVSHRGGTWIV
TLQNGDTASGDAVFSSMPLRSLVEALEPAPPQHVRAAAAALRHRALITVGVALRERVDLPYNWMYTPSGHMRVGRIQNYT
RWSPDLAPAQWGGTYLGLEYFTNTDGDLWLADDEGMTKVVEQDLRALGVAASAVEKIMVVRSQFAYPVYDSERERSVAVI
RDFLRHHHPSLRPMGRNGMHHYDNQDHAMLSAMQSVARYFGDDADPWQVNTELRYQESGLLRM

Sequences:

>Translated_463_residues
MEPDRNPLIIGAGPAGLTAALQLVKRGVTPRIYEASANVGGLARTPRRGDWRLDPGGHRFFTRSEAVLGIWRSLLPAEEW
VAVARRSAMLVQGRRVRYPLIGRDLLTQLGFRSGIHGLGDLLRARLIRRRRHGGASESFEDWGTREFGRHWYTLFFAGYV
RKTWLAEPADLTSDWANQRIRPIRWRKVDAFAARDVFRYPRLGPGQLWEAAAAVLADSGVVTSLESPVVKVSHRGGTWIV
TLQNGDTASGDAVFSSMPLRSLVEALEPAPPQHVRAAAAALRHRALITVGVALRERVDLPYNWMYTPSGHMRVGRIQNYT
RWSPDLAPAQWGGTYLGLEYFTNTDGDLWLADDEGMTKVVEQDLRALGVAASAVEKIMVVRSQFAYPVYDSERERSVAVI
RDFLRHHHPSLRPMGRNGMHHYDNQDHAMLSAMQSVARYFGDDADPWQVNTELRYQESGLLRM
>Mature_463_residues
MEPDRNPLIIGAGPAGLTAALQLVKRGVTPRIYEASANVGGLARTPRRGDWRLDPGGHRFFTRSEAVLGIWRSLLPAEEW
VAVARRSAMLVQGRRVRYPLIGRDLLTQLGFRSGIHGLGDLLRARLIRRRRHGGASESFEDWGTREFGRHWYTLFFAGYV
RKTWLAEPADLTSDWANQRIRPIRWRKVDAFAARDVFRYPRLGPGQLWEAAAAVLADSGVVTSLESPVVKVSHRGGTWIV
TLQNGDTASGDAVFSSMPLRSLVEALEPAPPQHVRAAAAALRHRALITVGVALRERVDLPYNWMYTPSGHMRVGRIQNYT
RWSPDLAPAQWGGTYLGLEYFTNTDGDLWLADDEGMTKVVEQDLRALGVAASAVEKIMVVRSQFAYPVYDSERERSVAVI
RDFLRHHHPSLRPMGRNGMHHYDNQDHAMLSAMQSVARYFGDDADPWQVNTELRYQESGLLRM

Specific function: Unknown

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71990307, Length=336, Percent_Identity=22.3214285714286, Blast_Score=83, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52095; Mature: 52095

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPDRNPLIIGAGPAGLTAALQLVKRGVTPRIYEASANVGGLARTPRRGDWRLDPGGHRF
CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCEE
FTRSEAVLGIWRSLLPAEEWVAVARRSAMLVQGRRVRYPLIGRDLLTQLGFRSGIHGLGD
EECHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHH
LLRARLIRRRRHGGASESFEDWGTREFGRHWYTLFFAGYVRKTWLAEPADLTSDWANQRI
HHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
RPIRWRKVDAFAARDVFRYPRLGPGQLWEAAAAVLADSGVVTSLESPVVKVSHRGGTWIV
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEE
TLQNGDTASGDAVFSSMPLRSLVEALEPAPPQHVRAAAAALRHRALITVGVALRERVDLP
EECCCCCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YNWMYTPSGHMRVGRIQNYTRWSPDLAPAQWGGTYLGLEYFTNTDGDLWLADDEGMTKVV
CCEEECCCCCEEECCCCCCCCCCCCCCCHHCCCEEEEEEEEECCCCCEEEECCCCHHHHH
EQDLRALGVAASAVEKIMVVRSQFAYPVYDSERERSVAVIRDFLRHHHPSLRPMGRNGMH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
HYDNQDHAMLSAMQSVARYFGDDADPWQVNTELRYQESGLLRM
CCCCCHHHHHHHHHHHHHHHCCCCCCEEECCEEEECCCCCCCC
>Mature Secondary Structure
MEPDRNPLIIGAGPAGLTAALQLVKRGVTPRIYEASANVGGLARTPRRGDWRLDPGGHRF
CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCEE
FTRSEAVLGIWRSLLPAEEWVAVARRSAMLVQGRRVRYPLIGRDLLTQLGFRSGIHGLGD
EECHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHH
LLRARLIRRRRHGGASESFEDWGTREFGRHWYTLFFAGYVRKTWLAEPADLTSDWANQRI
HHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
RPIRWRKVDAFAARDVFRYPRLGPGQLWEAAAAVLADSGVVTSLESPVVKVSHRGGTWIV
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEE
TLQNGDTASGDAVFSSMPLRSLVEALEPAPPQHVRAAAAALRHRALITVGVALRERVDLP
EECCCCCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YNWMYTPSGHMRVGRIQNYTRWSPDLAPAQWGGTYLGLEYFTNTDGDLWLADDEGMTKVV
CCEEECCCCCEEECCCCCCCCCCCCCCCHHCCCEEEEEEEEECCCCCEEEECCCCHHHHH
EQDLRALGVAASAVEKIMVVRSQFAYPVYDSERERSVAVIRDFLRHHHPSLRPMGRNGMH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
HYDNQDHAMLSAMQSVARYFGDDADPWQVNTELRYQESGLLRM
CCCCCHHHHHHHHHHHHHHHCCCCCCEEECCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA