Click here to switch to the map view.

The map label for this gene is 108800522

Identifier: 108800522

GI number: 108800522

Start: 3784320

End: 3784721

Strand: Reverse

Name: 108800522

Synonym: Mmcs_3556

Alternate gene names: NA

Gene position: 3784721-3784320 (Counterclockwise)

Preceding gene: 108800523

Following gene: 108800519

Centisome position: 66.34

GC content: 69.65

Gene sequence:

>402_bases
ATGAGCGAGCAGACCCCGTCCGGTCAGCCCCAGGCGCCCGACCCGTGGCGCAGCTTCCGCGGCGTGATGGCCGGCACGCT
CATCCTCGAGGCCATCGTCGTACTACTGGCGCTGCCGGTGGTGGGTTCGGTCGGTGGCGGGCTGACCGCGGCGTCGACGG
GCTACCTGATCGGCTTCGCGGTCGTGCTCGTGCTGATGTCCGGGATCCAAGGGCGGCCGTGGGCGATCTGGGCCAACCTC
GCAGTGCAGGTGGGCCTGATCGCGGGATGGGCCGTCTATCCCGGGGTGGGGATCATCGGCGTCATCTTCGCGGTGGTGTG
GTTGATGATCGTCTACCTGCGCGCGGAGGTGTTGCGTAGGCAGAAGCGCGGACTGCTGCCGGGCCAGCAGCCGCGCGAGT
AG

Upstream 100 bases:

>100_bases
AGGACTCCGGCGGCGAAGGACTCGCCGGTGCCGGGATGGTCATCACCGGGTCCGTGGTCACCGCGGGTGCCGCGAGGACC
CTGTTCGGACGGGATCCGCA

Downstream 100 bases:

>100_bases
GCCGCTAGGTGGTCACGTCGACCGCTTCGTCCGCGGCGGCGACCCGCCGGGTCGGCACCGTCGCCGCGGCCGCCAACGAC
AGTGCGGCGACGACGAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSEQTPSGQPQAPDPWRSFRGVMAGTLILEAIVVLLALPVVGSVGGGLTAASTGYLIGFAVVLVLMSGIQGRPWAIWANL
AVQVGLIAGWAVYPGVGIIGVIFAVVWLMIVYLRAEVLRRQKRGLLPGQQPRE

Sequences:

>Translated_133_residues
MSEQTPSGQPQAPDPWRSFRGVMAGTLILEAIVVLLALPVVGSVGGGLTAASTGYLIGFAVVLVLMSGIQGRPWAIWANL
AVQVGLIAGWAVYPGVGIIGVIFAVVWLMIVYLRAEVLRRQKRGLLPGQQPRE
>Mature_132_residues
SEQTPSGQPQAPDPWRSFRGVMAGTLILEAIVVLLALPVVGSVGGGLTAASTGYLIGFAVVLVLMSGIQGRPWAIWANLA
VQVGLIAGWAVYPGVGIIGVIFAVVWLMIVYLRAEVLRRQKRGLLPGQQPRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14103; Mature: 13972

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQTPSGQPQAPDPWRSFRGVMAGTLILEAIVVLLALPVVGSVGGGLTAASTGYLIGFA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VVLVLMSGIQGRPWAIWANLAVQVGLIAGWAVYPGVGIIGVIFAVVWLMIVYLRAEVLRR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKRGLLPGQQPRE
HHHCCCCCCCCCC
>Mature Secondary Structure 
SEQTPSGQPQAPDPWRSFRGVMAGTLILEAIVVLLALPVVGSVGGGLTAASTGYLIGFA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VVLVLMSGIQGRPWAIWANLAVQVGLIAGWAVYPGVGIIGVIFAVVWLMIVYLRAEVLRR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKRGLLPGQQPRE
HHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA