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The map label for this gene is ywaF [H]

Identifier: 108800392

GI number: 108800392

Start: 3635889

End: 3636626

Strand: Reverse

Name: ywaF [H]

Synonym: Mmcs_3426

Alternate gene names: 108800392

Gene position: 3636626-3635889 (Counterclockwise)

Preceding gene: 108800393

Following gene: 108800391

Centisome position: 63.74

GC content: 68.83

Gene sequence:

>738_bases
GTGACCGTCACCGCGGCACGACAGTTCGAGACGTACGGACCGTCGTACTGGGGTGCCATCGCCGTGTTCGTGGTCGGTGC
GGTGGTCCTGGTGTGGGTGGGCCGTCGGCAGACCGAGGAGCAGTCGCGGCGGTTCGGCCGGATCGTCGGTGGGCTCACCG
CGGTGATCTATGTGGCCGTACTGGTCTACTCGCTGTTCCCGCCGATGATCGGGCGGTCCGTGCCTCTGCGGTTGACCGAC
CTGGCGACGGTGGCCGCGGCGTGCGCGCTGTGGTCGCAGCGGCACTGGGCGTTCGCGCTGACCTACTACTGGGGACTGGT
GCTCAGCGCGCAGGCGCTGATCTCGCCGGTTCTGGTCGGCCCCGACTTCCCGCACTACACGTTTCTGGCGTTCTGGGCGA
TCCACCTGCTGGTCGTGTGGGCGGCGATCTACCTGACGTGGGGGCGGGGGATGCGACCGAGTTGGCGCAGCCTGCGGCTC
GTCCTGCTGGTCACCGCGGCGTGGGCGGCGGTCACGTTCGCGTTCAACCGGATCGCCGGAACCAACTACGGGTTCCTCAA
CGGCAAGCCGGTGACCGCGAGCCTGTTGGACGTGCTCGGCCCGTGGCCGGTGTACATCGTCTCGGCGACGGTGTTGATCG
TCATCGTCTGGGTGGCCATGACGCTGCCGTGGGTGCGGGCGAGGGAATCACAGCCGCATGCGACGATGGTGCCGCGTTCG
ATGCGCCGGGGGCGGTAG

Upstream 100 bases:

>100_bases
AGATCGCCGTCGCACTGGGCGCCGACACGCCCCGGGTGGCGTCAGGCACCGAGCGGTACCTGATCGACGACGACGGGCAG
ACGGTGTTCGCCGGGGCGCC

Downstream 100 bases:

>100_bases
CTCAGTCGGTTAGAGCCGTGGACTCATAATCCATTGGTCGCGGGTTCGAGCCCCGCCCGCCCCACCCCAGGTCTTGTATT
GCGGCGAAACTGCGCACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTVTAARQFETYGPSYWGAIAVFVVGAVVLVWVGRRQTEEQSRRFGRIVGGLTAVIYVAVLVYSLFPPMIGRSVPLRLTD
LATVAAACALWSQRHWAFALTYYWGLVLSAQALISPVLVGPDFPHYTFLAFWAIHLLVVWAAIYLTWGRGMRPSWRSLRL
VLLVTAAWAAVTFAFNRIAGTNYGFLNGKPVTASLLDVLGPWPVYIVSATVLIVIVWVAMTLPWVRARESQPHATMVPRS
MRRGR

Sequences:

>Translated_245_residues
MTVTAARQFETYGPSYWGAIAVFVVGAVVLVWVGRRQTEEQSRRFGRIVGGLTAVIYVAVLVYSLFPPMIGRSVPLRLTD
LATVAAACALWSQRHWAFALTYYWGLVLSAQALISPVLVGPDFPHYTFLAFWAIHLLVVWAAIYLTWGRGMRPSWRSLRL
VLLVTAAWAAVTFAFNRIAGTNYGFLNGKPVTASLLDVLGPWPVYIVSATVLIVIVWVAMTLPWVRARESQPHATMVPRS
MRRGR
>Mature_244_residues
TVTAARQFETYGPSYWGAIAVFVVGAVVLVWVGRRQTEEQSRRFGRIVGGLTAVIYVAVLVYSLFPPMIGRSVPLRLTDL
ATVAAACALWSQRHWAFALTYYWGLVLSAQALISPVLVGPDFPHYTFLAFWAIHLLVVWAAIYLTWGRGMRPSWRSLRLV
LLVTAAWAAVTFAFNRIAGTNYGFLNGKPVTASLLDVLGPWPVYIVSATVLIVIVWVAMTLPWVRARESQPHATMVPRSM
RRGR

Specific function: Unknown

COG id: COG5522

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011737 [H]

Pfam domain/function: PF09529 Intg_mem_TP0381 [H]

EC number: NA

Molecular weight: Translated: 27309; Mature: 27177

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTAARQFETYGPSYWGAIAVFVVGAVVLVWVGRRQTEEQSRRFGRIVGGLTAVIYVAV
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LVYSLFPPMIGRSVPLRLTDLATVAAACALWSQRHWAFALTYYWGLVLSAQALISPVLVG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDFPHYTFLAFWAIHLLVVWAAIYLTWGRGMRPSWRSLRLVLLVTAAWAAVTFAFNRIAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
TNYGFLNGKPVTASLLDVLGPWPVYIVSATVLIVIVWVAMTLPWVRARESQPHATMVPRS
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHCCHH
MRRGR
HHCCC
>Mature Secondary Structure 
TVTAARQFETYGPSYWGAIAVFVVGAVVLVWVGRRQTEEQSRRFGRIVGGLTAVIYVAV
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LVYSLFPPMIGRSVPLRLTDLATVAAACALWSQRHWAFALTYYWGLVLSAQALISPVLVG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDFPHYTFLAFWAIHLLVVWAAIYLTWGRGMRPSWRSLRLVLLVTAAWAAVTFAFNRIAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
TNYGFLNGKPVTASLLDVLGPWPVYIVSATVLIVIVWVAMTLPWVRARESQPHATMVPRS
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHCCHH
MRRGR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1806041; 7934828; 9384377 [H]