| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800391
Identifier: 108800391
GI number: 108800391
Start: 3634831
End: 3635724
Strand: Reverse
Name: 108800391
Synonym: Mmcs_3425
Alternate gene names: NA
Gene position: 3635724-3634831 (Counterclockwise)
Preceding gene: 108800392
Following gene: 108800388
Centisome position: 63.72
GC content: 64.88
Gene sequence:
>894_bases GTGAATCCACAACTGGACGGCTCATGTGTCTCGATCGACCTCCCGACGAGCATCGTCGAGCTGGTCGGAGGTTACGGCTT CCTGTCCAACCTGCTCTGCGGACTCGCGCTCGGCGCGGTCGCGTTCCTGCTCGGGAAGAAGGAAGCGGCGCCGCCCCACA CGATCGCGTTGCTCGCCTCCGGTGTGCTGATCCTCGCCGCCGACTCCTTCCTGTTCGCGTCGGTGCACTCGAGGAAGCCG TTCGTGATCGACGACGTGATCGCGCCGGGCGGCGAGTACGTGTGCTATCTCGTGTGGACCCTGGCGATGCCGGGCTTTGG AATGCTGATGGTCGGGGCGACCGTCCTGGTCGTGAGCATCGGTTGGATGATCGTCCAGTACGCCATCACGAACGACATCG AGAGTCCGATCTTCGCGGCCCTGGGAGGGGTCTTCAGCTTCTTCATCGTGCTGACCACGACGCTGTCGCTCGTCAACGTC TCGAACCAGTACCTGGTGTTCATGATGTACCCGGACCGGCCGTCCGGTCTGGCCGTCGCAGCTGTCTGGATCTTCGGTCT GGTCATGGCGGCGATCGCTTGCTCGATGATCGTGCTGAGGACGGCCGGCCTTTACCGGTATCGGAAGGCGCAGGCTGACT GGGGCGCCGTCGCCGACTCCCGGTTCCGGGCGCTCGCCCTCGCTGCCATCTCGATCTCCGCCTACGGCTTCCTGGCCATA ACGGTCGACGCGCTGATTTTCCTGTTCCGGGCTGACGACTCCGTGCGCGCGCCCGGCGTGATGTGGTCGGCGATCGTCCT GTGCCTGGGCCTACCGTGGGTGATCTACCTACCGATCTGCTACGCCCTGCCCGGACCGGTATTCAGAGCCGGCCGGAGAC CGCCGGTTCGATGA
Upstream 100 bases:
>100_bases CCCCAGGTCTTGTATTGCGGCGAAACTGCGCACAGATCAGGTCCAGCAGTGATTTCGTGATCTGGCAGCAGTCTCGGCGG TGCTGGGGAGGTGAGTCCTC
Downstream 100 bases:
>100_bases ATGCCTGACTCAGGACGGCGGTGTCTCAGCCATTCTCGCAACCCGTTCCGTTGCCGTCCCGGTCGAGTTCGTTCGTAGAT GTCGGTCCCGATGACGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MNPQLDGSCVSIDLPTSIVELVGGYGFLSNLLCGLALGAVAFLLGKKEAAPPHTIALLASGVLILAADSFLFASVHSRKP FVIDDVIAPGGEYVCYLVWTLAMPGFGMLMVGATVLVVSIGWMIVQYAITNDIESPIFAALGGVFSFFIVLTTTLSLVNV SNQYLVFMMYPDRPSGLAVAAVWIFGLVMAAIACSMIVLRTAGLYRYRKAQADWGAVADSRFRALALAAISISAYGFLAI TVDALIFLFRADDSVRAPGVMWSAIVLCLGLPWVIYLPICYALPGPVFRAGRRPPVR
Sequences:
>Translated_297_residues MNPQLDGSCVSIDLPTSIVELVGGYGFLSNLLCGLALGAVAFLLGKKEAAPPHTIALLASGVLILAADSFLFASVHSRKP FVIDDVIAPGGEYVCYLVWTLAMPGFGMLMVGATVLVVSIGWMIVQYAITNDIESPIFAALGGVFSFFIVLTTTLSLVNV SNQYLVFMMYPDRPSGLAVAAVWIFGLVMAAIACSMIVLRTAGLYRYRKAQADWGAVADSRFRALALAAISISAYGFLAI TVDALIFLFRADDSVRAPGVMWSAIVLCLGLPWVIYLPICYALPGPVFRAGRRPPVR >Mature_297_residues MNPQLDGSCVSIDLPTSIVELVGGYGFLSNLLCGLALGAVAFLLGKKEAAPPHTIALLASGVLILAADSFLFASVHSRKP FVIDDVIAPGGEYVCYLVWTLAMPGFGMLMVGATVLVVSIGWMIVQYAITNDIESPIFAALGGVFSFFIVLTTTLSLVNV SNQYLVFMMYPDRPSGLAVAAVWIFGLVMAAIACSMIVLRTAGLYRYRKAQADWGAVADSRFRALALAAISISAYGFLAI TVDALIFLFRADDSVRAPGVMWSAIVLCLGLPWVIYLPICYALPGPVFRAGRRPPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31725; Mature: 31725
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPQLDGSCVSIDLPTSIVELVGGYGFLSNLLCGLALGAVAFLLGKKEAAPPHTIALLAS CCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHC GVLILAADSFLFASVHSRKPFVIDDVIAPGGEYVCYLVWTLAMPGFGMLMVGATVLVVSI CCCEEEECHHHHHHHHCCCCEEEEHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GWMIVQYAITNDIESPIFAALGGVFSFFIVLTTTLSLVNVSNQYLVFMMYPDRPSGLAVA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH AVWIFGLVMAAIACSMIVLRTAGLYRYRKAQADWGAVADSRFRALALAAISISAYGFLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TVDALIFLFRADDSVRAPGVMWSAIVLCLGLPWVIYLPICYALPGPVFRAGRRPPVR HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCCCC >Mature Secondary Structure MNPQLDGSCVSIDLPTSIVELVGGYGFLSNLLCGLALGAVAFLLGKKEAAPPHTIALLAS CCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHC GVLILAADSFLFASVHSRKPFVIDDVIAPGGEYVCYLVWTLAMPGFGMLMVGATVLVVSI CCCEEEECHHHHHHHHCCCCEEEEHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GWMIVQYAITNDIESPIFAALGGVFSFFIVLTTTLSLVNVSNQYLVFMMYPDRPSGLAVA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH AVWIFGLVMAAIACSMIVLRTAGLYRYRKAQADWGAVADSRFRALALAAISISAYGFLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TVDALIFLFRADDSVRAPGVMWSAIVLCLGLPWVIYLPICYALPGPVFRAGRRPPVR HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA