| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is hscA [C]
Identifier: 108800352
GI number: 108800352
Start: 3587884
End: 3589590
Strand: Reverse
Name: hscA [C]
Synonym: Mmcs_3386
Alternate gene names: 108800352
Gene position: 3589590-3587884 (Counterclockwise)
Preceding gene: 108800353
Following gene: 108800349
Centisome position: 62.92
GC content: 75.75
Gene sequence:
>1707_bases ATGACGGACGCAACCGGGCTGTCGATCGGGGCCACCGCACTGACGGCGGTGGTCGTGGACCGCGCGGCCGTGCGGCGCTC ACCGGTGCTGACGCTGTTCCCGCACCGGCCGCCGGAGGTCGGCGTGCCGAGCGAGAACCCCCGCCTCGACGAGCGCGGGC TCGTCATCACCGACTTCGTCGACCGCGTCGGGGACCCGGTCGGCATCCTCGCCGCCGACGGGACCAGCCACCGCGGCGCG ACGCTGGTGGCCGATGCGCTGCGGGCCCTGCTCTATGCGCTGCCCCGCGGTCACGAACCGGGCGCACCGATAGGGGTCAC CCACCCGGCCCACTGGCACGCCGGATCCGTCGACGCGCTGCGCGCCGCCCTGGCCGAGATCGCCGAGTTCGGCCCGGCCA CCCCCGTCCTGCCCGACGCGGCGGCCGCGCTGACGGCGTTGCAGGCCGAACCGGGTCTGCCCACCCGCGGCCTGATCGCG CTCTGCGACTTCGGCGGCTCGGGGACGAGCATCACCGTGGTGGACGCCGCCGACGGATATCGACCCGTCGCCCCGACCGT CCGCCATCTCGACCTGTCCGGTGACCTGATCGATCAGGCGCTGCTGACGCACGTCCTCGCCGGTGTCCCTGACTCGGCGG ACCTGTCCGGAACGTCGGCGATCGGCTCACTGACCCGGTTGCGGGGCCAGTGCCGCGCCGCCAAGGAGCGGTTGTCGACC GACACGGTGACCGCGTTGAGCGCCGAACTGCCGGGCAGCGCCGGCGAGGTCCGGGTCACGCGTACCGAACTCGACGACGT GGTGCGCGGCCCACTCGCCGAATTCGTCGACGTGCTGCGCCACACCATCGAGCGCACCGGTGCGCGACCGGCCGACCTGG CCGCGGTGGCCACTGCAGGCGGGGGTGCGCGCATACCGATCGTCACGACCGCCCTGTCGGAGAACTTCCGCGTCCCTGTG GTCACCACCCCGCGGCCGGAACTGTCGGCCGCGATCGGTGCCGGGCTGACCGCCGTGCGCGGGCCCGACGACGACCACAC CGCACTCGCCGCGGCAGCCCCGCTCACGGCGGCCGCGCCGGCCGCGTTCGAAAACGCCGAATCGGGCACCTTCGGAGCGC TGGCGTGGTCGGACGCCGACGACATCCCCGATGTCGCACCCGCCGCCTACGAGGCCGACCCGGCCGCCGACCCGCAGGAT CTTCGGCCGCGACTGATGTTCGGCGCCGCCGAGTCCGCCGCGGACGACCGGCCCGCCGTGGTGCCGTGGTACCGGCGGAC GCCGGTGGCGCTGGCGATCGGGGCGGCGGCAGTGCTCGCGGCGCTCGCCGCGGCGGTGTTCCTGGTCAACCGCGACGACG GTGACGCACCCGCGACGACGGACACCACCACCCCTGTGACGACGACCACCGAGGGCCCGGCGCCGGCCGCGCCACCGCCG GTCGACAATCCCGAACCCCAGGCCCCCGCGCCCGAGACCGTCACCCAGCAGGCGCCACCGCCGGCGGCCACCGAGGCGCC ACCGCCGCCGCCGGCCCAGGAGCCGCCACCGCCACCGCCGGCCGAGGAGCCGCCGCCCCCGCCGCCGGCCGAAGAGCCGC CACCCCCGCCGCCCACCACGCAGCCGCCGCCGGTGATCCCGACGTTGCCCTACACCACGATCCCGGGTCTGCCGTTCGTC CCGGCACCTCCCGGCTTCGGCGGTTAG
Upstream 100 bases:
>100_bases CGGGCGCTCAACGCGGTGCCCGCCGTCAACGACCTGCGGCCGGGGTGGGTCACGGCACTGGATTTACCGTTGATCGCCGG AGCGGGCACAATTCGCTGAC
Downstream 100 bases:
>100_bases CGCGCGCGGCGCACGCCGGTCACCGCCGAGCGGGGCAGCCGGCCGGCCCGCGAGTGGCCGGTCATCCGGTCGCCGGCGAC GACGACGTCGAAGGCGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MTDATGLSIGATALTAVVVDRAAVRRSPVLTLFPHRPPEVGVPSENPRLDERGLVITDFVDRVGDPVGILAADGTSHRGA TLVADALRALLYALPRGHEPGAPIGVTHPAHWHAGSVDALRAALAEIAEFGPATPVLPDAAAALTALQAEPGLPTRGLIA LCDFGGSGTSITVVDAADGYRPVAPTVRHLDLSGDLIDQALLTHVLAGVPDSADLSGTSAIGSLTRLRGQCRAAKERLST DTVTALSAELPGSAGEVRVTRTELDDVVRGPLAEFVDVLRHTIERTGARPADLAAVATAGGGARIPIVTTALSENFRVPV VTTPRPELSAAIGAGLTAVRGPDDDHTALAAAAPLTAAAPAAFENAESGTFGALAWSDADDIPDVAPAAYEADPAADPQD LRPRLMFGAAESAADDRPAVVPWYRRTPVALAIGAAAVLAALAAAVFLVNRDDGDAPATTDTTTPVTTTTEGPAPAAPPP VDNPEPQAPAPETVTQQAPPPAATEAPPPPPAQEPPPPPPAEEPPPPPPAEEPPPPPPTTQPPPVIPTLPYTTIPGLPFV PAPPGFGG
Sequences:
>Translated_568_residues MTDATGLSIGATALTAVVVDRAAVRRSPVLTLFPHRPPEVGVPSENPRLDERGLVITDFVDRVGDPVGILAADGTSHRGA TLVADALRALLYALPRGHEPGAPIGVTHPAHWHAGSVDALRAALAEIAEFGPATPVLPDAAAALTALQAEPGLPTRGLIA LCDFGGSGTSITVVDAADGYRPVAPTVRHLDLSGDLIDQALLTHVLAGVPDSADLSGTSAIGSLTRLRGQCRAAKERLST DTVTALSAELPGSAGEVRVTRTELDDVVRGPLAEFVDVLRHTIERTGARPADLAAVATAGGGARIPIVTTALSENFRVPV VTTPRPELSAAIGAGLTAVRGPDDDHTALAAAAPLTAAAPAAFENAESGTFGALAWSDADDIPDVAPAAYEADPAADPQD LRPRLMFGAAESAADDRPAVVPWYRRTPVALAIGAAAVLAALAAAVFLVNRDDGDAPATTDTTTPVTTTTEGPAPAAPPP VDNPEPQAPAPETVTQQAPPPAATEAPPPPPAQEPPPPPPAEEPPPPPPAEEPPPPPPTTQPPPVIPTLPYTTIPGLPFV PAPPGFGG >Mature_567_residues TDATGLSIGATALTAVVVDRAAVRRSPVLTLFPHRPPEVGVPSENPRLDERGLVITDFVDRVGDPVGILAADGTSHRGAT LVADALRALLYALPRGHEPGAPIGVTHPAHWHAGSVDALRAALAEIAEFGPATPVLPDAAAALTALQAEPGLPTRGLIAL CDFGGSGTSITVVDAADGYRPVAPTVRHLDLSGDLIDQALLTHVLAGVPDSADLSGTSAIGSLTRLRGQCRAAKERLSTD TVTALSAELPGSAGEVRVTRTELDDVVRGPLAEFVDVLRHTIERTGARPADLAAVATAGGGARIPIVTTALSENFRVPVV TTPRPELSAAIGAGLTAVRGPDDDHTALAAAAPLTAAAPAAFENAESGTFGALAWSDADDIPDVAPAAYEADPAADPQDL RPRLMFGAAESAADDRPAVVPWYRRTPVALAIGAAAVLAALAAAVFLVNRDDGDAPATTDTTTPVTTTTEGPAPAAPPPV DNPEPQAPAPETVTQQAPPPAATEAPPPPPAQEPPPPPPAEEPPPPPPAEEPPPPPPTTQPPPVIPTLPYTTIPGLPFVP APPGFGG
Specific function: Chaperone Involved In The Maturation Of Iron-Sulfur Cluster-Containing Proteins. Has A Low Intrinsic Atpase Activity Which Is Markedly Stimulated By Hscb. Involved In The Maturation Of Iscu. [C]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57581; Mature: 57450
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDATGLSIGATALTAVVVDRAAVRRSPVLTLFPHRPPEVGVPSENPRLDERGLVITDFV CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHH DRVGDPVGILAADGTSHRGATLVADALRALLYALPRGHEPGAPIGVTHPAHWHAGSVDAL HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH RAALAEIAEFGPATPVLPDAAAALTALQAEPGLPTRGLIALCDFGGSGTSITVVDAADGY HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCC RPVAPTVRHLDLSGDLIDQALLTHVLAGVPDSADLSGTSAIGSLTRLRGQCRAAKERLST CCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCH DTVTALSAELPGSAGEVRVTRTELDDVVRGPLAEFVDVLRHTIERTGARPADLAAVATAG HHHHHHHHCCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHEEEEECC GGARIPIVTTALSENFRVPVVTTPRPELSAAIGAGLTAVRGPDDDHTALAAAAPLTAAAP CCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHCCCEEECCCCCCCHHHHHHCCHHHHCC AAFENAESGTFGALAWSDADDIPDVAPAAYEADPAADPQDLRPRLMFGAAESAADDRPAV HHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCHHHCCCCCCCC VPWYRRTPVALAIGAAAVLAALAAAVFLVNRDDGDAPATTDTTTPVTTTTEGPAPAAPPP CCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCC VDNPEPQAPAPETVTQQAPPPAATEAPPPPPAQEPPPPPPAEEPPPPPPAEEPPPPPPTT CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPPPVIPTLPYTTIPGLPFVPAPPGFGG CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDATGLSIGATALTAVVVDRAAVRRSPVLTLFPHRPPEVGVPSENPRLDERGLVITDFV CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHH DRVGDPVGILAADGTSHRGATLVADALRALLYALPRGHEPGAPIGVTHPAHWHAGSVDAL HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH RAALAEIAEFGPATPVLPDAAAALTALQAEPGLPTRGLIALCDFGGSGTSITVVDAADGY HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCC RPVAPTVRHLDLSGDLIDQALLTHVLAGVPDSADLSGTSAIGSLTRLRGQCRAAKERLST CCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCH DTVTALSAELPGSAGEVRVTRTELDDVVRGPLAEFVDVLRHTIERTGARPADLAAVATAG HHHHHHHHCCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHEEEEECC GGARIPIVTTALSENFRVPVVTTPRPELSAAIGAGLTAVRGPDDDHTALAAAAPLTAAAP CCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHCCCEEECCCCCCCHHHHHHCCHHHHCC AAFENAESGTFGALAWSDADDIPDVAPAAYEADPAADPQDLRPRLMFGAAESAADDRPAV HHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCHHHCCCCCCCC VPWYRRTPVALAIGAAAVLAALAAAVFLVNRDDGDAPATTDTTTPVTTTTEGPAPAAPPP CCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCC VDNPEPQAPAPETVTQQAPPPAATEAPPPPPAQEPPPPPPAEEPPPPPPAEEPPPPPPTT CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPPPVIPTLPYTTIPGLPFVPAPPGFGG CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA