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The map label for this gene is 108800310

Identifier: 108800310

GI number: 108800310

Start: 3543849

End: 3544988

Strand: Reverse

Name: 108800310

Synonym: Mmcs_3344

Alternate gene names: NA

Gene position: 3544988-3543849 (Counterclockwise)

Preceding gene: 108800311

Following gene: 108800309

Centisome position: 62.13

GC content: 69.74

Gene sequence:

>1140_bases
ATGAGCGTACGGCTGGCCGACGTCATCGGCGTGCTCGACGAGGCGTATCCGCCGCGATTGGCCGAGGACTGGGATTCGGT
CGGGCTGGTGTGCGGTGACCCCGACGAACCCGTGGAATCGGTGACCGTCGCGGTCGACGCCACCGAGGCCGTCATCGCCG
AAGTGCCCGAGCGGGGGCTCCTGCTGGCGCATCATCCGCTGTTGTTGCGGGGGGTGGATTCCGTCGCGGCGAGCACCCCC
AAGGGTGCGCTGGTGCATTCGCTCATCCGCACCGGACGGTCCCTGTTCACCGCGCACACCAACGCCGACTCCGCGTCGCC
GGGGGTGTCCGATGCGCTGGCCGACGCGCTCGGGCTCACCGTCGAGGAGGTGCTCTCACCGATCGCCGCCGACACCGAAC
TGGACAAATGGGTGGTCTACGTACCCGCAGAGAACGCGGATGCGGTGCGCGAGGCCATGTTCGGTGCGGGTGCCGGTCAG
ATCGGTGACTACTCGCACTGCAGCTGGAGCGCGCCGGGCACCGGACAGTTCCTGCCCCACGAGGGAGCCTCACCGGCCGT
CGGCAGCGTCGGCTCGGTCGAGCGCGTCGCCGAAGAACGCGTCGAGGTGATCGCGCCGTCGGCGCGGCGCCGTGACCTGC
TCAACGCGGTGCGTGGCGCACATCCCTACGAGGAGCCCGCGTTCGACATCTTCGACATCGCGCCGATCCCCGGCGACGTC
GGAATCGGCCGAATCGCGTCGTTGCCGACACCGGAAACGTTGTCCGACTTCGTGTCCCGGGTCAACGCCGCGTTGCCCGC
CACCACCTGGGGGGTGCGCGCCGCGGGGGATCCGTCGACCGTGGTGTCACGGGTGGCGGTGTGCGGGGGAGCGGGTGACT
CGCTGCTCGGCGCGGTGTCGCGCGCGGGGGTACAGGCTTATCTGACCGCCGATCTGCGCCACCATCCCGCCGACGAGCAC
CGGCGGGCGTCGCCGGTGGCGCTGGTCGACGTCGCACACTGGGCAAGCGAGTTCCCGTGGTGCGAACAGGCCGCCGGTGT
GCTGCGGCGCCACTTCTCTGATGCGTTGCCGGTGCGGGTCTGTGCCCTGCGCACCGATCCATGGAACCTAGGAACTGGTA
GGGAAACAAGTGAAAGCTGA

Upstream 100 bases:

>100_bases
GGCGGTGCGACACATTCGTCGGCCTGGATGGTCAGTTCCTGAGGGCGGCGGTCCGCGAGGAGTGGCCGGTGCTCGCCGAG
GCGCTGGCGGAGGCGATGCG

Downstream 100 bases:

>100_bases
TGTCTGGCAGCAACATTCGTTGCTACAGCTGGCCGAGGTGGACGCCGGGCTGGCGCGGATCGAACACCGGGTGCGCAAGC
TGCCCGAACAGGACGAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSVRLADVIGVLDEAYPPRLAEDWDSVGLVCGDPDEPVESVTVAVDATEAVIAEVPERGLLLAHHPLLLRGVDSVAASTP
KGALVHSLIRTGRSLFTAHTNADSASPGVSDALADALGLTVEEVLSPIAADTELDKWVVYVPAENADAVREAMFGAGAGQ
IGDYSHCSWSAPGTGQFLPHEGASPAVGSVGSVERVAEERVEVIAPSARRRDLLNAVRGAHPYEEPAFDIFDIAPIPGDV
GIGRIASLPTPETLSDFVSRVNAALPATTWGVRAAGDPSTVVSRVAVCGGAGDSLLGAVSRAGVQAYLTADLRHHPADEH
RRASPVALVDVAHWASEFPWCEQAAGVLRRHFSDALPVRVCALRTDPWNLGTGRETSES

Sequences:

>Translated_379_residues
MSVRLADVIGVLDEAYPPRLAEDWDSVGLVCGDPDEPVESVTVAVDATEAVIAEVPERGLLLAHHPLLLRGVDSVAASTP
KGALVHSLIRTGRSLFTAHTNADSASPGVSDALADALGLTVEEVLSPIAADTELDKWVVYVPAENADAVREAMFGAGAGQ
IGDYSHCSWSAPGTGQFLPHEGASPAVGSVGSVERVAEERVEVIAPSARRRDLLNAVRGAHPYEEPAFDIFDIAPIPGDV
GIGRIASLPTPETLSDFVSRVNAALPATTWGVRAAGDPSTVVSRVAVCGGAGDSLLGAVSRAGVQAYLTADLRHHPADEH
RRASPVALVDVAHWASEFPWCEQAAGVLRRHFSDALPVRVCALRTDPWNLGTGRETSES
>Mature_378_residues
SVRLADVIGVLDEAYPPRLAEDWDSVGLVCGDPDEPVESVTVAVDATEAVIAEVPERGLLLAHHPLLLRGVDSVAASTPK
GALVHSLIRTGRSLFTAHTNADSASPGVSDALADALGLTVEEVLSPIAADTELDKWVVYVPAENADAVREAMFGAGAGQI
GDYSHCSWSAPGTGQFLPHEGASPAVGSVGSVERVAEERVEVIAPSARRRDLLNAVRGAHPYEEPAFDIFDIAPIPGDVG
IGRIASLPTPETLSDFVSRVNAALPATTWGVRAAGDPSTVVSRVAVCGGAGDSLLGAVSRAGVQAYLTADLRHHPADEHR
RASPVALVDVAHWASEFPWCEQAAGVLRRHFSDALPVRVCALRTDPWNLGTGRETSES

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 39676; Mature: 39544

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLADVIGVLDEAYPPRLAEDWDSVGLVCGDPDEPVESVTVAVDATEAVIAEVPERGL
CCCHHHHHHHHHHHCCCCCHHHCHHCCCEEECCCCCCHHHEEEEECHHHHHHHHCCCCCE
LLAHHPLLLRGVDSVAASTPKGALVHSLIRTGRSLFTAHTNADSASPGVSDALADALGLT
EEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHCCC
VEEVLSPIAADTELDKWVVYVPAENADAVREAMFGAGAGQIGDYSHCSWSAPGTGQFLPH
HHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EGASPAVGSVGSVERVAEERVEVIAPSARRRDLLNAVRGAHPYEEPAFDIFDIAPIPGDV
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
GIGRIASLPTPETLSDFVSRVNAALPATTWGVRAAGDPSTVVSRVAVCGGAGDSLLGAVS
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
RAGVQAYLTADLRHHPADEHRRASPVALVDVAHWASEFPWCEQAAGVLRRHFSDALPVRV
HHCHHEEEEEHHHCCCCHHHHCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEE
CALRTDPWNLGTGRETSES
EEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVRLADVIGVLDEAYPPRLAEDWDSVGLVCGDPDEPVESVTVAVDATEAVIAEVPERGL
CCHHHHHHHHHHHCCCCCHHHCHHCCCEEECCCCCCHHHEEEEECHHHHHHHHCCCCCE
LLAHHPLLLRGVDSVAASTPKGALVHSLIRTGRSLFTAHTNADSASPGVSDALADALGLT
EEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHCCC
VEEVLSPIAADTELDKWVVYVPAENADAVREAMFGAGAGQIGDYSHCSWSAPGTGQFLPH
HHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EGASPAVGSVGSVERVAEERVEVIAPSARRRDLLNAVRGAHPYEEPAFDIFDIAPIPGDV
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
GIGRIASLPTPETLSDFVSRVNAALPATTWGVRAAGDPSTVVSRVAVCGGAGDSLLGAVS
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
RAGVQAYLTADLRHHPADEHRRASPVALVDVAHWASEFPWCEQAAGVLRRHFSDALPVRV
HHCHHEEEEEHHHCCCCHHHHCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEE
CALRTDPWNLGTGRETSES
EEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]