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The map label for this gene is 108800285

Identifier: 108800285

GI number: 108800285

Start: 3517244

End: 3517723

Strand: Reverse

Name: 108800285

Synonym: Mmcs_3319

Alternate gene names: NA

Gene position: 3517723-3517244 (Counterclockwise)

Preceding gene: 108800292

Following gene: 108800278

Centisome position: 61.66

GC content: 68.96

Gene sequence:

>480_bases
ATGGCCCGCGCGCTCGGGTCCTGGCTGTCCGGTCCGGAATCGAATCGCGGACCCGGCGGCCCGGGCCAACCACCGAATGA
ATATCCGGGTCAACGGCTCGGGTTGCCCGACAGCGGGCCGGGGTCGATGGCCCGGTTCGGCCGCCGGGTCGCCGCCATGC
TCGTCGACTGGTTCATCGCCTACGGGTTGGCCGCGCTGGCCATGACGCTCGGGCTGATCTCGGTGGGCGCGATGTCGACT
GTGATCCTCGTCATCTGGTTCGTCATCGGGGCGGTGTCGGTGCGCCTGTTCAGATTCACCCCCGGTCAGTACGCGCTCGG
CCTGATGGTGGTGTCGATGGACGACCGGGAGCACGTGGGGTTCGGCCGCGCTTTGGTCCGCGGGCTGATGATCGCGCTGG
TGATTCCGGCACTGTTCACCGACGAGGATCTGCGGGGCCTGCACGACCTGGCCACCAAGACCGCCGTGGTGCGGCGCTGA

Upstream 100 bases:

>100_bases
CGATGTTGCACGGTCGTCAACCGCATGTTGCGCCGAAGTTACGGCGGAGCATCACACCCGGGTTCGAGGCAGGCGCAGCG
AGCCCGCCTATCCTTTCAGT

Downstream 100 bases:

>100_bases
ACGTGAGCTAGTGCTCGAAGATCGGCACGAAGATCGCGCACGAGTTCGCGTTCGGTGTCAGGTCTCGTGGCGGATCTGCC
CGTTCATCATCGTCATCGTG

Product: RDD domain-containing protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; RDD Domain-Containing Protein; RDD Family Domain-Containing Protein; RDD Family Domain Protein; TransRDD Family Protein

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MARALGSWLSGPESNRGPGGPGQPPNEYPGQRLGLPDSGPGSMARFGRRVAAMLVDWFIAYGLAALAMTLGLISVGAMST
VILVIWFVIGAVSVRLFRFTPGQYALGLMVVSMDDREHVGFGRALVRGLMIALVIPALFTDEDLRGLHDLATKTAVVRR

Sequences:

>Translated_159_residues
MARALGSWLSGPESNRGPGGPGQPPNEYPGQRLGLPDSGPGSMARFGRRVAAMLVDWFIAYGLAALAMTLGLISVGAMST
VILVIWFVIGAVSVRLFRFTPGQYALGLMVVSMDDREHVGFGRALVRGLMIALVIPALFTDEDLRGLHDLATKTAVVRR
>Mature_158_residues
ARALGSWLSGPESNRGPGGPGQPPNEYPGQRLGLPDSGPGSMARFGRRVAAMLVDWFIAYGLAALAMTLGLISVGAMSTV
ILVIWFVIGAVSVRLFRFTPGQYALGLMVVSMDDREHVGFGRALVRGLMIALVIPALFTDEDLRGLHDLATKTAVVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16980; Mature: 16849

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS00334 MYB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARALGSWLSGPESNRGPGGPGQPPNEYPGQRLGLPDSGPGSMARFGRRVAAMLVDWFIA
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YGLAALAMTLGLISVGAMSTVILVIWFVIGAVSVRLFRFTPGQYALGLMVVSMDDREHVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHEEHEEEECCCCCHHHH
FGRALVRGLMIALVIPALFTDEDLRGLHDLATKTAVVRR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARALGSWLSGPESNRGPGGPGQPPNEYPGQRLGLPDSGPGSMARFGRRVAAMLVDWFIA
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YGLAALAMTLGLISVGAMSTVILVIWFVIGAVSVRLFRFTPGQYALGLMVVSMDDREHVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHEEHEEEECCCCCHHHH
FGRALVRGLMIALVIPALFTDEDLRGLHDLATKTAVVRR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA