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The map label for this gene is ctaC [H]

Identifier: 108800264

GI number: 108800264

Start: 3495101

End: 3496159

Strand: Reverse

Name: ctaC [H]

Synonym: Mmcs_3298

Alternate gene names: 108800264

Gene position: 3496159-3495101 (Counterclockwise)

Preceding gene: 108800266

Following gene: 108800263

Centisome position: 61.28

GC content: 65.16

Gene sequence:

>1059_bases
GTGACCCCTCGCGGGCTGAAGGCGGTGGCACGAAAAGCCGCACTGGTGGTGGTTCTGGGTGCCACAGCACTGGTGCTCAG
TGGCTGCAGCTGGACAGAGGCGCTCGCTCTGGGCTGGCCGAAGGGCATTACGCCCGAGGCGCATCTGAACCGTGAACTGT
GGATCGGTTCGATGATCGCCGCGCTCGTCGTCGGCGGCATCGTCTACTTCCTGATCTTCTGGGTGAGCGCGTTCCACCGG
AAGAAGGCCTCCGACACCGAGTTGCCGCGCCAGTTCGGCTACAACATGCCGCTGGAGCTGGTCCTCACGGTCATCCCGTT
CCTGATCATCTCGGTGCTGTTCTACTTCACCGTCGTGGTCCAGGAGCAGATGGTGGGCAAGGAGGACAACCCCGAGGTCG
TCGTCGACGTGACGGCGTTCCAGTGGAACTGGAAGTTCGGCTACAACAAGGTGAACTTCGCCGACGGCACGATGAACTAC
GACGGCGTCGACGAAGAGCGCAGCGCCGCGGTCGCCTCCCGCCCGAGCGAAGAGGGTGCGGGCGCGGTCGGTGAGCCGGA
AGCGGCCCACACCGAGCATGGTGCCATCGCGGGCCAGAACCCCGAGGACCGCAGCTACCTGGCGTTCGACGAGATCGAGA
CGCTGGGCACCAGCGACGAGATCCCGGTCCTGGTGCTGCCCTCCGAGAAGCGCGTCGAGTTCCGGATCGCCTCGGCCGAC
GTGGCGCACGCCTTCTGGGTGCCGGAGTTCCTGTTCAAGCGGGACGTGTACCCCAACCCTGAACAGAACAACTCGGACAA
CGTCTTCCAGGTCAGCGAGATCACCGAGACCGGCGCGTTCGTGGGCCGCTGCGCCGAGCTCTGCGGCACCTACCACGCGA
TGATGAACTTCGAGGTGCGCGTGGTTCCGCCGAACGATTTCAAGGCGTACCTGAACCAGCGCATGGCGGGTAAGACGAAC
GCCGAGGCACTGATCGCCATCAACCAGCCACCCACCGCCGTCACCACCAAGCCGTTCGACACGCGGCGCGGTGAGATGGC
CCCGCAAGCGAGCAGGTAG

Upstream 100 bases:

>100_bases
TCTCGAGACCGCCACCCCGGCGTGGTCTACGCTGCGTAGTATTCAACGGTGGCATGGACCGCACAGCGGTCGGCTTAGCG
GACTTCTAGGAGGCCCCAAC

Downstream 100 bases:

>100_bases
GACTCCTCGATGCACATCGAAGCCAGGTTGTTCGAGTTCCTCACGGCGTTCTTCGCCCTGTCGGCCGTCGTGTACGCCAC
GCTGACCGCGATGTTCGGCA

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II [H]

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTPRGLKAVARKAALVVVLGATALVLSGCSWTEALALGWPKGITPEAHLNRELWIGSMIAALVVGGIVYFLIFWVSAFHR
KKASDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEQMVGKEDNPEVVVDVTAFQWNWKFGYNKVNFADGTMNY
DGVDEERSAAVASRPSEEGAGAVGEPEAAHTEHGAIAGQNPEDRSYLAFDEIETLGTSDEIPVLVLPSEKRVEFRIASAD
VAHAFWVPEFLFKRDVYPNPEQNNSDNVFQVSEITETGAFVGRCAELCGTYHAMMNFEVRVVPPNDFKAYLNQRMAGKTN
AEALIAINQPPTAVTTKPFDTRRGEMAPQASR

Sequences:

>Translated_352_residues
MTPRGLKAVARKAALVVVLGATALVLSGCSWTEALALGWPKGITPEAHLNRELWIGSMIAALVVGGIVYFLIFWVSAFHR
KKASDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEQMVGKEDNPEVVVDVTAFQWNWKFGYNKVNFADGTMNY
DGVDEERSAAVASRPSEEGAGAVGEPEAAHTEHGAIAGQNPEDRSYLAFDEIETLGTSDEIPVLVLPSEKRVEFRIASAD
VAHAFWVPEFLFKRDVYPNPEQNNSDNVFQVSEITETGAFVGRCAELCGTYHAMMNFEVRVVPPNDFKAYLNQRMAGKTN
AEALIAINQPPTAVTTKPFDTRRGEMAPQASR
>Mature_351_residues
TPRGLKAVARKAALVVVLGATALVLSGCSWTEALALGWPKGITPEAHLNRELWIGSMIAALVVGGIVYFLIFWVSAFHRK
KASDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEQMVGKEDNPEVVVDVTAFQWNWKFGYNKVNFADGTMNYD
GVDEERSAAVASRPSEEGAGAVGEPEAAHTEHGAIAGQNPEDRSYLAFDEIETLGTSDEIPVLVLPSEKRVEFRIASADV
AHAFWVPEFLFKRDVYPNPEQNNSDNVFQVSEITETGAFVGRCAELCGTYHAMMNFEVRVVPPNDFKAYLNQRMAGKTNA
EALIAINQPPTAVTTKPFDTRRGEMAPQASR

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 38807; Mature: 38675

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRGLKAVARKAALVVVLGATALVLSGCSWTEALALGWPKGITPEAHLNRELWIGSMIA
CCCHHHHHHHHHHHEEEEECHHHHHHCCCCHHHHHHCCCCCCCCCHHHCCHHHHHHHHHH
ALVVGGIVYFLIFWVSAFHRKKASDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QEQMVGKEDNPEVVVDVTAFQWNWKFGYNKVNFADGTMNYDGVDEERSAAVASRPSEEGA
HHHHHCCCCCCCEEEEEEEEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCC
GAVGEPEAAHTEHGAIAGQNPEDRSYLAFDEIETLGTSDEIPVLVLPSEKRVEFRIASAD
CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCCEEEECCCCCEEEEEECCH
VAHAFWVPEFLFKRDVYPNPEQNNSDNVFQVSEITETGAFVGRCAELCGTYHAMMNFEVR
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
VVPPNDFKAYLNQRMAGKTNAEALIAINQPPTAVTTKPFDTRRGEMAPQASR
EECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPRGLKAVARKAALVVVLGATALVLSGCSWTEALALGWPKGITPEAHLNRELWIGSMIA
CCHHHHHHHHHHHEEEEECHHHHHHCCCCHHHHHHCCCCCCCCCHHHCCHHHHHHHHHH
ALVVGGIVYFLIFWVSAFHRKKASDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QEQMVGKEDNPEVVVDVTAFQWNWKFGYNKVNFADGTMNYDGVDEERSAAVASRPSEEGA
HHHHHCCCCCCCEEEEEEEEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCC
GAVGEPEAAHTEHGAIAGQNPEDRSYLAFDEIETLGTSDEIPVLVLPSEKRVEFRIASAD
CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCCEEEECCCCCEEEEEECCH
VAHAFWVPEFLFKRDVYPNPEQNNSDNVFQVSEITETGAFVGRCAELCGTYHAMMNFEVR
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
VVPPNDFKAYLNQRMAGKTNAEALIAINQPPTAVTTKPFDTRRGEMAPQASR
EECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA