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The map label for this gene is mmpS3 [H]

Identifier: 108800262

GI number: 108800262

Start: 3493608

End: 3494501

Strand: Reverse

Name: mmpS3 [H]

Synonym: Mmcs_3296

Alternate gene names: 108800262

Gene position: 3494501-3493608 (Counterclockwise)

Preceding gene: 108800263

Following gene: 108800261

Centisome position: 61.25

GC content: 71.25

Gene sequence:

>894_bases
ATGAGCGGGCCGAACCCCCCAGGGCCGGACTCGCCGGGACCGGACCAGCCCGAGCGGGAGGGCGGTCGGCACTCGGCACC
CGACGAAGCGACCGAACAGGTCGGTGCGGCCGAGCAACCGGCCGCCGCCACGGGTGCGACGGAGGCCTACTCCCAGGCGT
ACTCCGCCCCCGAATCGGAACAGTTCAGCAGCGGGCCGTATGTGCCCGCGGACCCGGCACTGTACGACTACGACAGCTAT
GAACCGGTGTCCGACGTCGGCGAGGAGCAGGCGCCGCCACGTTGGCCGTGGGTCGTCGGTGTCACCGCGATCATCGCTGC
GATCTCGCTGGTGGTGTCGGTGGCGCTGCTGGTGACGAAGACCGACACCGATCAGTTGGCCACCCCGGCTACCACCACGA
CGACGCCTCCGCCCCCGGTGCAGGACGAGATCACCACGACGACGCCCCCGCCGCCGCCACCACCGCCGCCGACGACCGAG
CCGCCGCCTCCTCCGCCACCGGAGACCGTGACGGTCACCGAGCCGCCGCCTCCGCCGCCCTCGGCCGAGGCGCCGCCGCC
ACCACCGCCTGAGACGACGACACCGCCGCCGCCCCCGCCGCCGACCACCACCACACCCGCGGGCCCCCGCCAGGTGACCT
ACTCGGTGACGGGTACCAAGGCGCCCGGAGACATCATCACCGTCACCTACGTGGACGCCTCGGGACGCAGGCGCACCCAG
CGCAACGTGTACATCCCCTGGTCGCTGACCGTCACGCCGATCTCGCAGTCGGAGGTCGGGTCGGTGCAGGCGTCGAGCCT
GTTCCTGGTCAGCAAATTGAACTGTTCGATCACGACGAGCGATGGGACGGTCTTGTCGTCCAATACCGGCAACGCCGCGC
AGACGAGCTGCTGA

Upstream 100 bases:

>100_bases
TCGCCGGTCACCCGTCGTTGGGTAGTGTTTCCCGGGGCGCGGTGAGCCGTTTCGGCCGCATGCCCGCGCCGGTGACGCAG
TCGAGAAGGAATAGGCGTAG

Downstream 100 bases:

>100_bases
TGACATACCCCAGCGACACCGCGCACGGGGCGCGGCCGGACACCGGCGGGCCAGACAGCCTGGACAACGTCGACCGCATC
CTGCTCGGCGCCGGCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSGPNPPGPDSPGPDQPEREGGRHSAPDEATEQVGAAEQPAAATGATEAYSQAYSAPESEQFSSGPYVPADPALYDYDSY
EPVSDVGEEQAPPRWPWVVGVTAIIAAISLVVSVALLVTKTDTDQLATPATTTTTPPPPVQDEITTTTPPPPPPPPPTTE
PPPPPPPETVTVTEPPPPPPSAEAPPPPPPETTTPPPPPPPTTTTPAGPRQVTYSVTGTKAPGDIITVTYVDASGRRRTQ
RNVYIPWSLTVTPISQSEVGSVQASSLFLVSKLNCSITTSDGTVLSSNTGNAAQTSC

Sequences:

>Translated_297_residues
MSGPNPPGPDSPGPDQPEREGGRHSAPDEATEQVGAAEQPAAATGATEAYSQAYSAPESEQFSSGPYVPADPALYDYDSY
EPVSDVGEEQAPPRWPWVVGVTAIIAAISLVVSVALLVTKTDTDQLATPATTTTTPPPPVQDEITTTTPPPPPPPPPTTE
PPPPPPPETVTVTEPPPPPPSAEAPPPPPPETTTPPPPPPPTTTTPAGPRQVTYSVTGTKAPGDIITVTYVDASGRRRTQ
RNVYIPWSLTVTPISQSEVGSVQASSLFLVSKLNCSITTSDGTVLSSNTGNAAQTSC
>Mature_296_residues
SGPNPPGPDSPGPDQPEREGGRHSAPDEATEQVGAAEQPAAATGATEAYSQAYSAPESEQFSSGPYVPADPALYDYDSYE
PVSDVGEEQAPPRWPWVVGVTAIIAAISLVVSVALLVTKTDTDQLATPATTTTTPPPPVQDEITTTTPPPPPPPPPTTEP
PPPPPPETVTVTEPPPPPPSAEAPPPPPPETTTPPPPPPPTTTTPAGPRQVTYSVTGTKAPGDIITVTYVDASGRRRTQR
NVYIPWSLTVTPISQSEVGSVQASSLFLVSKLNCSITTSDGTVLSSNTGNAAQTSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 30613; Mature: 30481

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPNPPGPDSPGPDQPEREGGRHSAPDEATEQVGAAEQPAAATGATEAYSQAYSAPESE
CCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCH
QFSSGPYVPADPALYDYDSYEPVSDVGEEQAPPRWPWVVGVTAIIAAISLVVSVALLVTK
HCCCCCCCCCCCCEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEC
TDTDQLATPATTTTTPPPPVQDEITTTTPPPPPPPPPTTEPPPPPPPETVTVTEPPPPPP
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
SAEAPPPPPPETTTPPPPPPPTTTTPAGPRQVTYSVTGTKAPGDIITVTYVDASGRRRTQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC
RNVYIPWSLTVTPISQSEVGSVQASSLFLVSKLNCSITTSDGTVLSSNTGNAAQTSC
CEEEEEEEEEEECCCHHHCCCEECCEEEEEEECCEEEECCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
SGPNPPGPDSPGPDQPEREGGRHSAPDEATEQVGAAEQPAAATGATEAYSQAYSAPESE
CCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCH
QFSSGPYVPADPALYDYDSYEPVSDVGEEQAPPRWPWVVGVTAIIAAISLVVSVALLVTK
HCCCCCCCCCCCCEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEC
TDTDQLATPATTTTTPPPPVQDEITTTTPPPPPPPPPTTEPPPPPPPETVTVTEPPPPPP
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
SAEAPPPPPPETTTPPPPPPPTTTTPAGPRQVTYSVTGTKAPGDIITVTYVDASGRRRTQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC
RNVYIPWSLTVTPISQSEVGSVQASSLFLVSKLNCSITTSDGTVLSSNTGNAAQTSC
CEEEEEEEEEEECCCHHHCCCEECCEEEEEEECCEEEECCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]