| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800241
Identifier: 108800241
GI number: 108800241
Start: 3471903
End: 3472844
Strand: Reverse
Name: 108800241
Synonym: Mmcs_3275
Alternate gene names: NA
Gene position: 3472844-3471903 (Counterclockwise)
Preceding gene: 108800243
Following gene: 108800240
Centisome position: 60.87
GC content: 67.41
Gene sequence:
>942_bases GTGACCTCCGGCGAGTCGGCCGGTATCCCGGTCGCGCCACGCGCAGGTCGGCGTAAGTTTTCGAGCGTGCACCTGACCCT GCAGCTGGACTTCCTCACCGTCGATCGCCTGCCGCTGCTGTGCTGCCTGGTCGCCTTCATCCTCACCTTCTTCGTGACGC GCACGATCGTGCGCTACATCAGGCGGCACGCCGACAGCGACGCTCCCCGCAAGTGGTGGCAGCCGCGCAACATCGCCGGT ACAGGCGGCATGCACATCCACCACGTGGTGATCGGGGTGATTCTCGTGATGGTGTCGGGTCTCACCATGGTGACGCTGGC CGTCAACGGGGGAGTACCCGAATTCACGGCGGCAGCAACCCTTTTCGGAATCGGTGCCGCGCTGGTGCTCGACGAGTACG CCCTGATCCTGCATCTGTCGGACGTGTACTGGTCCGAGGACGGCCGCACCTCGGTGGATGCGGTGTTCGCCGCCGTGGCG GTGGCGGGTCTGCTCATCCTGGGGTTCAATCCACTGTCGTTCTTCGACGTCGGCATCTGGCGCGACGACCACAGCGTGGC CGCGCGCGCGACGGTCATCGCCCTGGCGGTGGTGACGCTGATGCTGGCGATGGTGGTGTTGGCCAAGGGAAAGGTGTGGA CCGGGTTGGTGGGCATGTTCATCACACCCCTGCTGTTCGTGGGCGCGTTGCGGCTGTCCCGCCCGCACGCGCCGTGGGCC CGCTGGCGCTACACGAACCGGCCGCGCAAGATGCACCGGGCGCTGGAACGTGAGCGCTGGCTGCGCAGGCCCGTCGTGCA GGCCAAACTGTGGCTGCAGGACGCCATCGCCGGGATGCCGCGATTCCCCGACGATGCGAAGGTCGACGAACAGCTGGACC GCGAGATCCACGCCGCACCCGCACCGCAGAAGGTCGCCGCGGTCGAGAAAGCCGCGGTGTAG
Upstream 100 bases:
>100_bases GCCGAGCGCGGCGAGGGTCAGGAGGCAGAACGTCCGCCACGCGAGGGTTGGCGCCCAAGCAGGCGTCCGCCGAGTACTCA TGTCGCCGACCAGCCTATCG
Downstream 100 bases:
>100_bases ATGCGCTACTTCTACGACACCGAGTTCATCGACAACGGCCGCACCATCGAGCTCATCTCGATCGGCGTGGCGGCCGAGGA CGGCCGCGAGTACTACGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTSGESAGIPVAPRAGRRKFSSVHLTLQLDFLTVDRLPLLCCLVAFILTFFVTRTIVRYIRRHADSDAPRKWWQPRNIAG TGGMHIHHVVIGVILVMVSGLTMVTLAVNGGVPEFTAAATLFGIGAALVLDEYALILHLSDVYWSEDGRTSVDAVFAAVA VAGLLILGFNPLSFFDVGIWRDDHSVAARATVIALAVVTLMLAMVVLAKGKVWTGLVGMFITPLLFVGALRLSRPHAPWA RWRYTNRPRKMHRALERERWLRRPVVQAKLWLQDAIAGMPRFPDDAKVDEQLDREIHAAPAPQKVAAVEKAAV
Sequences:
>Translated_313_residues MTSGESAGIPVAPRAGRRKFSSVHLTLQLDFLTVDRLPLLCCLVAFILTFFVTRTIVRYIRRHADSDAPRKWWQPRNIAG TGGMHIHHVVIGVILVMVSGLTMVTLAVNGGVPEFTAAATLFGIGAALVLDEYALILHLSDVYWSEDGRTSVDAVFAAVA VAGLLILGFNPLSFFDVGIWRDDHSVAARATVIALAVVTLMLAMVVLAKGKVWTGLVGMFITPLLFVGALRLSRPHAPWA RWRYTNRPRKMHRALERERWLRRPVVQAKLWLQDAIAGMPRFPDDAKVDEQLDREIHAAPAPQKVAAVEKAAV >Mature_312_residues TSGESAGIPVAPRAGRRKFSSVHLTLQLDFLTVDRLPLLCCLVAFILTFFVTRTIVRYIRRHADSDAPRKWWQPRNIAGT GGMHIHHVVIGVILVMVSGLTMVTLAVNGGVPEFTAAATLFGIGAALVLDEYALILHLSDVYWSEDGRTSVDAVFAAVAV AGLLILGFNPLSFFDVGIWRDDHSVAARATVIALAVVTLMLAMVVLAKGKVWTGLVGMFITPLLFVGALRLSRPHAPWAR WRYTNRPRKMHRALERERWLRRPVVQAKLWLQDAIAGMPRFPDDAKVDEQLDREIHAAPAPQKVAAVEKAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34492; Mature: 34361
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGESAGIPVAPRAGRRKFSSVHLTLQLDFLTVDRLPLLCCLVAFILTFFVTRTIVRYI CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RRHADSDAPRKWWQPRNIAGTGGMHIHHVVIGVILVMVSGLTMVTLAVNGGVPEFTAAAT HHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCHHHHHHH LFGIGAALVLDEYALILHLSDVYWSEDGRTSVDAVFAAVAVAGLLILGFNPLSFFDVGIW HHHHHHHHHHHHHHHHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEE RDDHSVAARATVIALAVVTLMLAMVVLAKGKVWTGLVGMFITPLLFVGALRLSRPHAPWA ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH RWRYTNRPRKMHRALERERWLRRPVVQAKLWLQDAIAGMPRFPDDAKVDEQLDREIHAAP HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC APQKVAAVEKAAV CCHHHHHHHHHCC >Mature Secondary Structure TSGESAGIPVAPRAGRRKFSSVHLTLQLDFLTVDRLPLLCCLVAFILTFFVTRTIVRYI CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RRHADSDAPRKWWQPRNIAGTGGMHIHHVVIGVILVMVSGLTMVTLAVNGGVPEFTAAAT HHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCHHHHHHH LFGIGAALVLDEYALILHLSDVYWSEDGRTSVDAVFAAVAVAGLLILGFNPLSFFDVGIW HHHHHHHHHHHHHHHHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEE RDDHSVAARATVIALAVVTLMLAMVVLAKGKVWTGLVGMFITPLLFVGALRLSRPHAPWA ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH RWRYTNRPRKMHRALERERWLRRPVVQAKLWLQDAIAGMPRFPDDAKVDEQLDREIHAAP HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC APQKVAAVEKAAV CCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA