| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800240
Identifier: 108800240
GI number: 108800240
Start: 3471396
End: 3471902
Strand: Reverse
Name: 108800240
Synonym: Mmcs_3274
Alternate gene names: NA
Gene position: 3471902-3471396 (Counterclockwise)
Preceding gene: 108800241
Following gene: 108800239
Centisome position: 60.85
GC content: 69.03
Gene sequence:
>507_bases ATGCGCTACTTCTACGACACCGAGTTCATCGACAACGGCCGCACCATCGAGCTCATCTCGATCGGCGTGGCGGCCGAGGA CGGCCGCGAGTACTACGCGGTGTCGACCGAGTTCGACCCGGAACGCGCGGGCAGCTGGGTCCGCAAACACGTGCTTCCGA AGCTGCCGTCGCCGGCGTCGAAGTCCTGGCGGTCCCGCCGCGAGATCCGATCCGAACTCGAGGACTTCTTCGGCATCGAC GGCGACGAGCCGATCGAGCTGTGGGCCTGGGTGGGCGCCTACGACCACGTGGTGCTCTGCCAGCTGTGGGGGCCGATGAC CGCGCTGCCACCCGCGATACCCCGGTTCACCCGCGAACTGCGCCAGTTCTGGGAGGACCGCGGCTCACCGCGGATGCCAC CGCGGCCGCGTGACTCCCACGACGCGCTGGTCGACGCCCGCCACAACCTGCTGCGCTACCAGGTCATGACCGGATCAGCG GGGATGGACGGCCGTTCCCGGCCCTGA
Upstream 100 bases:
>100_bases ATTCCCCGACGATGCGAAGGTCGACGAACAGCTGGACCGCGAGATCCACGCCGCACCCGCACCGCAGAAGGTCGCCGCGG TCGAGAAAGCCGCGGTGTAG
Downstream 100 bases:
>100_bases CTTACCATTGACGGGTGAACTGGACCGTCGACATCCCCATCGACCAGCTCCCCGACCTGCCGCCCCTGCCGGACGAGCTG CGTCACCGCCTGGATTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRYFYDTEFIDNGRTIELISIGVAAEDGREYYAVSTEFDPERAGSWVRKHVLPKLPSPASKSWRSRREIRSELEDFFGID GDEPIELWAWVGAYDHVVLCQLWGPMTALPPAIPRFTRELRQFWEDRGSPRMPPRPRDSHDALVDARHNLLRYQVMTGSA GMDGRSRP
Sequences:
>Translated_168_residues MRYFYDTEFIDNGRTIELISIGVAAEDGREYYAVSTEFDPERAGSWVRKHVLPKLPSPASKSWRSRREIRSELEDFFGID GDEPIELWAWVGAYDHVVLCQLWGPMTALPPAIPRFTRELRQFWEDRGSPRMPPRPRDSHDALVDARHNLLRYQVMTGSA GMDGRSRP >Mature_168_residues MRYFYDTEFIDNGRTIELISIGVAAEDGREYYAVSTEFDPERAGSWVRKHVLPKLPSPASKSWRSRREIRSELEDFFGID GDEPIELWAWVGAYDHVVLCQLWGPMTALPPAIPRFTRELRQFWEDRGSPRMPPRPRDSHDALVDARHNLLRYQVMTGSA GMDGRSRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19452; Mature: 19452
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYFYDTEFIDNGRTIELISIGVAAEDGREYYAVSTEFDPERAGSWVRKHVLPKLPSPAS CCCCCCCEECCCCCEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHH KSWRSRREIRSELEDFFGIDGDEPIELWAWVGAYDHVVLCQLWGPMTALPPAIPRFTREL HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCEEEEECCCCHHCCCCCHHHHHHHH RQFWEDRGSPRMPPRPRDSHDALVDARHNLLRYQVMTGSAGMDGRSRP HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCC >Mature Secondary Structure MRYFYDTEFIDNGRTIELISIGVAAEDGREYYAVSTEFDPERAGSWVRKHVLPKLPSPAS CCCCCCCEECCCCCEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHH KSWRSRREIRSELEDFFGIDGDEPIELWAWVGAYDHVVLCQLWGPMTALPPAIPRFTREL HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCEEEEECCCCHHCCCCCHHHHHHHH RQFWEDRGSPRMPPRPRDSHDALVDARHNLLRYQVMTGSAGMDGRSRP HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA