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The map label for this gene is yfiH [C]

Identifier: 108800218

GI number: 108800218

Start: 3446149

End: 3446841

Strand: Reverse

Name: yfiH [C]

Synonym: Mmcs_3252

Alternate gene names: 108800218

Gene position: 3446841-3446149 (Counterclockwise)

Preceding gene: 108800219

Following gene: 108800217

Centisome position: 60.41

GC content: 74.75

Gene sequence:

>693_bases
GTGCGGCGGGTGACCACGACCCGCGCAGGCGGTGTCTCGGCGCCGCCGTACGACACCTTCAACCTCGGTGACCACGTCGG
AGATGATCCGGCCGCCGTCGCCGCCAACCGCGAGCGCCTCGCGAAGGCGACCGGGCTCGACGGCCGCCTGGTCTGGATGC
ACCAGGTGCACAGCGACCGGGTGGTGCGCGTGACCGGCCCGCACGACGGACCGGTCGACGACGCCGACGGTCTGGTGACC
ACGACCCGCCGCCTGGGGCTGGCCGTCGTCACCGCCGACTGTGTGCCGGTCCTGCTGGCCGACGCGCGCGCCGGGGTGAT
CGGCGCCGTCCACGCCGGACGGGTCGGGGCGCGCGACGGCGTCGTCGCGCGCGCGGTGGAGACGATGTGCGAGGCCGGCG
CGCGGGTCGAGGACATCTCGGTACTGCTCGGCCCCGCGGTGAGCGGCCGCAACTACGAGGTGCCCGAGGCGATGGCCGCC
GACGTCGAGGCGGCGCTGCCCGGTAGCCGGACCACCACCGCACGCGGCACCGCCGGCCTGGACCTGCGGGCCGGAATCGC
CCGCCAGCTCACTGATCTGGGCATCACGGCCATCGACGTCGACCCGCGCTGCACCGTCGCCGACCGCAACCTGTTCAGCC
ATCGCCGCAACGCTCCCACCGGCAGGCTGGCCTCGCTGGTGTGGATGGAGTGA

Upstream 100 bases:

>100_bases
CATCGGTGGCGACGATGGCGGGATCGCCGACGACGACGTCGACGTGCCACCGTTCATGCGGCACTGACCCGGGTTCGATA
CTGGGAACGTGACCGTTCGT

Downstream 100 bases:

>100_bases
GCACCGTGGTCACCACCCGGGAGTCCGAGTTGGCTGCCTCGCTGGCCGCGCTGCGCGAACGGCTCGCCCGCGCCGCGGAC
GCGGCGGGCCGCGATGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRRVTTTRAGGVSAPPYDTFNLGDHVGDDPAAVAANRERLAKATGLDGRLVWMHQVHSDRVVRVTGPHDGPVDDADGLVT
TTRRLGLAVVTADCVPVLLADARAGVIGAVHAGRVGARDGVVARAVETMCEAGARVEDISVLLGPAVSGRNYEVPEAMAA
DVEAALPGSRTTTARGTAGLDLRAGIARQLTDLGITAIDVDPRCTVADRNLFSHRRNAPTGRLASLVWME

Sequences:

>Translated_230_residues
MRRVTTTRAGGVSAPPYDTFNLGDHVGDDPAAVAANRERLAKATGLDGRLVWMHQVHSDRVVRVTGPHDGPVDDADGLVT
TTRRLGLAVVTADCVPVLLADARAGVIGAVHAGRVGARDGVVARAVETMCEAGARVEDISVLLGPAVSGRNYEVPEAMAA
DVEAALPGSRTTTARGTAGLDLRAGIARQLTDLGITAIDVDPRCTVADRNLFSHRRNAPTGRLASLVWME
>Mature_230_residues
MRRVTTTRAGGVSAPPYDTFNLGDHVGDDPAAVAANRERLAKATGLDGRLVWMHQVHSDRVVRVTGPHDGPVDDADGLVT
TTRRLGLAVVTADCVPVLLADARAGVIGAVHAGRVGARDGVVARAVETMCEAGARVEDISVLLGPAVSGRNYEVPEAMAA
DVEAALPGSRTTTARGTAGLDLRAGIARQLTDLGITAIDVDPRCTVADRNLFSHRRNAPTGRLASLVWME

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=223, Percent_Identity=27.8026905829596, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI190194372, Length=223, Percent_Identity=27.8026905829596, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1788945, Length=234, Percent_Identity=37.6068376068376, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 24040; Mature: 24040

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVTTTRAGGVSAPPYDTFNLGDHVGDDPAAVAANRERLAKATGLDGRLVWMHQVHSDR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHCCCCCEEEEEEECCCCC
VVRVTGPHDGPVDDADGLVTTTRRLGLAVVTADCVPVLLADARAGVIGAVHAGRVGARDG
EEEEECCCCCCCCCCCCEEEHHHHHCEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCC
VVARAVETMCEAGARVEDISVLLGPAVSGRNYEVPEAMAADVEAALPGSRTTTARGTAGL
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHCHHHCCCCCCCCCCCCCCCC
DLRAGIARQLTDLGITAIDVDPRCTVADRNLFSHRRNAPTGRLASLVWME
CHHHHHHHHHHHCCEEEEECCCCCEEECCHHHHHHCCCCCCHHHEEEECC
>Mature Secondary Structure
MRRVTTTRAGGVSAPPYDTFNLGDHVGDDPAAVAANRERLAKATGLDGRLVWMHQVHSDR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHCCCCCEEEEEEECCCCC
VVRVTGPHDGPVDDADGLVTTTRRLGLAVVTADCVPVLLADARAGVIGAVHAGRVGARDG
EEEEECCCCCCCCCCCCEEEHHHHHCEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCC
VVARAVETMCEAGARVEDISVLLGPAVSGRNYEVPEAMAADVEAALPGSRTTTARGTAGL
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHCHHHCCCCCCCCCCCCCCCC
DLRAGIARQLTDLGITAIDVDPRCTVADRNLFSHRRNAPTGRLASLVWME
CHHHHHHHHHHHCCEEEEECCCCCEEECCHHHHHHCCCCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]