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The map label for this gene is sepF

Identifier: 108800216

GI number: 108800216

Start: 3444659

End: 3445321

Strand: Reverse

Name: sepF

Synonym: Mmcs_3250

Alternate gene names: 108800216

Gene position: 3445321-3444659 (Counterclockwise)

Preceding gene: 108800217

Following gene: 108800215

Centisome position: 60.39

GC content: 69.68

Gene sequence:

>663_bases
ATGAGCACACTGCACAAGGTCAAGGCCTACTTCGGTATGGCGCCCATGGATGACTACGACGACGAGTACTACGAGGACGA
CGACCGCGCGGAGCGCGGCGCGGCCCGTGGCTACGCCCGTCGGCCCCGCGAGGACCGGTTCGAGGAGGAGGGCTACATCG
ATCGCGCCGGCCGCGAGTACGACGACCGGCCGGCACCGCGCGAATACGACGAACCGCCGATCTACCGCGGCGGGTATGAC
GAGCCGCGGTTCGACCCCCGACTCCGCGGCCCGCGTGAGTTCGAGCGGCCGGCACCTCGGCTGGGTGCGCTGCGCGGTTC
GACCCGCGGCGCCCTGGCGATGGACCCGCGCCGCATGGCGATGCTCTTCGAGGAAGGCAGCCCACTGGCCAAGATCACGA
CCCTGCGTCCCAAGGACTACAGCGAGGCCCGGACCATCGGGGAGAAGTTCCGTGACGGGACCCCGGTGATCATGGACCTG
GTCTCCATGGACAACGCCGACGCCAAGCGTCTCGTCGACTTCGCCGCCGGCCTGGCGTTCGCGCTGCGCGGGTCGTTCGA
CAAGGTCGCCACCAAGGTCTTCCTGCTCTCGCCGGCCGACGTGGACGTCACCGCCGACGAGCGCCGGCGCATCGCCGAGG
CGGGCTTCTACGCGTATCAGTGA

Upstream 100 bases:

>100_bases
GCTTATGGGACCTCGTCCTCTAACGTCACCCTGAGTAGTCACTCCAGTCACATCTTCATCACAGACACCACAGCTTGACG
GTCTTCAGAAGGGTCGCGCG

Downstream 100 bases:

>100_bases
CTTCGGCGGTGCCTCGGCCCGGCAGGTAGGCTGACGAGGTTGTTTTCTCACCTGTATCGAATGTCACATATCTGCCCGTA
GTGAGGTCGAGCTTCCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSTLHKVKAYFGMAPMDDYDDEYYEDDDRAERGAARGYARRPREDRFEEEGYIDRAGREYDDRPAPREYDEPPIYRGGYD
EPRFDPRLRGPREFERPAPRLGALRGSTRGALAMDPRRMAMLFEEGSPLAKITTLRPKDYSEARTIGEKFRDGTPVIMDL
VSMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVTADERRRIAEAGFYAYQ

Sequences:

>Translated_220_residues
MSTLHKVKAYFGMAPMDDYDDEYYEDDDRAERGAARGYARRPREDRFEEEGYIDRAGREYDDRPAPREYDEPPIYRGGYD
EPRFDPRLRGPREFERPAPRLGALRGSTRGALAMDPRRMAMLFEEGSPLAKITTLRPKDYSEARTIGEKFRDGTPVIMDL
VSMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVTADERRRIAEAGFYAYQ
>Mature_219_residues
STLHKVKAYFGMAPMDDYDDEYYEDDDRAERGAARGYARRPREDRFEEEGYIDRAGREYDDRPAPREYDEPPIYRGGYDE
PRFDPRLRGPREFERPAPRLGALRGSTRGALAMDPRRMAMLFEEGSPLAKITTLRPKDYSEARTIGEKFRDGTPVIMDLV
SMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVTADERRRIAEAGFYAYQ

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_MYCSJ (A3Q1L2)

Other databases:

- EMBL:   CP000580
- RefSeq:   YP_001071530.1
- STRING:   A3Q1L2
- EnsemblBacteria:   EBMYCT00000047987
- GeneID:   4878973
- GenomeReviews:   CP000580_GR
- KEGG:   mjl:Mjls_3261
- eggNOG:   COG1799
- GeneTree:   EBGT00050000016738
- HOGENOM:   HBG700081
- OMA:   FKAYFGM
- ProtClustDB:   CLSK2778360
- BioCyc:   MSP164757:MJLS_3261-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 25146; Mature: 25015

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLHKVKAYFGMAPMDDYDDEYYEDDDRAERGAARGYARRPREDRFEEEGYIDRAGREY
CCHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCCC
DDRPAPREYDEPPIYRGGYDEPRFDPRLRGPREFERPAPRLGALRGSTRGALAMDPRRMA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCCCCCEEECHHHHH
MLFEEGSPLAKITTLRPKDYSEARTIGEKFRDGTPVIMDLVSMDNADAKRLVDFAAGLAF
HHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
ALRGSFDKVATKVFLLSPADVDVTADERRRIAEAGFYAYQ
HHHCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STLHKVKAYFGMAPMDDYDDEYYEDDDRAERGAARGYARRPREDRFEEEGYIDRAGREY
CHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCCC
DDRPAPREYDEPPIYRGGYDEPRFDPRLRGPREFERPAPRLGALRGSTRGALAMDPRRMA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCCCCCEEECHHHHH
MLFEEGSPLAKITTLRPKDYSEARTIGEKFRDGTPVIMDLVSMDNADAKRLVDFAAGLAF
HHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
ALRGSFDKVATKVFLLSPADVDVTADERRRIAEAGFYAYQ
HHHCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA