| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800149
Identifier: 108800149
GI number: 108800149
Start: 3374468
End: 3374878
Strand: Reverse
Name: 108800149
Synonym: Mmcs_3183
Alternate gene names: NA
Gene position: 3374878-3374468 (Counterclockwise)
Preceding gene: 108800150
Following gene: 108800148
Centisome position: 59.15
GC content: 55.72
Gene sequence:
>411_bases ATGGCTGTCTTCGCTGATGCGGAAGAGGTTTACCGCTACCTCGCCGGCATCTTTCGACGAGGTTTGGAGAACGAAGACCT TGCGAACAGACTTGCCGGGTCCGGGGTGGTGTTACGGATCCACTACACCGATCCGGATGCGGTAGTAACCGTGGATATGC CGGAGAAGGTCGTAGAGACCGGCGCGGACAGTGGCGTTACACCGAATGTCGAATTGTTCATGTCCGCGGATACCGGCAAC AGGTTCTGGTTGGGGAAGGTGAACTTGACCATGGCGATGGCGAAAGGAACTGTACGAGCGAAAGGTCCTGTCACCAAACT GATCAAGCTCATACCGCAGGCAAAGAACCTCTTTCCGGAATACCGGGCAATCCTTGAGGCCGACAAGCGTCACGACCTGC TCAATGTGTGA
Upstream 100 bases:
>100_bases CTCCTATGAGTTCTGATTGCTTCGGAGCAAGCCGAACTGGTTGCGACCCAGCAGATTTATTTGAGCGCTTTGAATTGTGT CATAGGAAGGGAGAATCACG
Downstream 100 bases:
>100_bases TGTCGGTGCGGTACCGCGCCCGGGCCCGGGTGAGCGGCGCGGGCCTCTGGGCGATGTGCCCGGAGATCATCCAGGACAGT TCGCGCGACCACCGTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MAVFADAEEVYRYLAGIFRRGLENEDLANRLAGSGVVLRIHYTDPDAVVTVDMPEKVVETGADSGVTPNVELFMSADTGN RFWLGKVNLTMAMAKGTVRAKGPVTKLIKLIPQAKNLFPEYRAILEADKRHDLLNV
Sequences:
>Translated_136_residues MAVFADAEEVYRYLAGIFRRGLENEDLANRLAGSGVVLRIHYTDPDAVVTVDMPEKVVETGADSGVTPNVELFMSADTGN RFWLGKVNLTMAMAKGTVRAKGPVTKLIKLIPQAKNLFPEYRAILEADKRHDLLNV >Mature_135_residues AVFADAEEVYRYLAGIFRRGLENEDLANRLAGSGVVLRIHYTDPDAVVTVDMPEKVVETGADSGVTPNVELFMSADTGNR FWLGKVNLTMAMAKGTVRAKGPVTKLIKLIPQAKNLFPEYRAILEADKRHDLLNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15006; Mature: 14874
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFADAEEVYRYLAGIFRRGLENEDLANRLAGSGVVLRIHYTDPDAVVTVDMPEKVVET CCEECCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHC GADSGVTPNVELFMSADTGNRFWLGKVNLTMAMAKGTVRAKGPVTKLIKLIPQAKNLFPE CCCCCCCCCEEEEEEECCCCEEEEEECEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHH YRAILEADKRHDLLNV HHHHHHHHHCCCCCCC >Mature Secondary Structure AVFADAEEVYRYLAGIFRRGLENEDLANRLAGSGVVLRIHYTDPDAVVTVDMPEKVVET CEECCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHC GADSGVTPNVELFMSADTGNRFWLGKVNLTMAMAKGTVRAKGPVTKLIKLIPQAKNLFPE CCCCCCCCCEEEEEEECCCCEEEEEECEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHH YRAILEADKRHDLLNV HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA