| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is priA [H]
Identifier: 108800025
GI number: 108800025
Start: 3235346
End: 3236116
Strand: Reverse
Name: priA [H]
Synonym: Mmcs_3059
Alternate gene names: 108800025
Gene position: 3236116-3235346 (Counterclockwise)
Preceding gene: 108800026
Following gene: 108800024
Centisome position: 56.72
GC content: 69.91
Gene sequence:
>771_bases TTGTCCGTCGTGCCAGAGAAGTCGGTGTCCGAGAAAAGACCGTTGATCCTCCTCCCCGCCGTCGATGTCGTCGAAGGCCG TGCCGTGCGCCTGGTACAGGGCAAGGCCGGCAGTGAAACCGAGTACGGGTCGGCGCTCGACGCCGCGCTCGGCTGGCAGC GCGACGGGGCCGAGTGGATCCATCTGGTGGATCTCGACGCCGCGTTCGGGCGGGGGTCGAACCGCGAACTGCTCGCCGAC GTCGTGGGCCGCCTCGATGTGGCGGTCGAACTGTCCGGCGGCATCCGTGACGACGAGTCGCTCGAGGCAGCGCTGGCCAC CGGATGCGCCCGGGTCAACATCGGCACCGCCGCGCTGGAGAACCCGCAGTGGTGCGCGAAAGTCGTCGCCGAGTTCGGCG ACAAGGTGGCAGTGGGCCTCGACGTCAAGATCGTCGACGATCAGCACCGCCTGCGCGGACGGGGTTGGGAGACCGACGGC GGGGACCTGTGGGAGGTGCTCGACCGCCTCGACTCCGAAGGCTGCTCGCGCTACGTCGTCACCGACGTGACCAAGGACGG CACCCTTCAGGGGCCGAACCTCGATCTGCTCGGCCGCGTCGCCGACCGCACCGATGCGCCGGTGATCGCCTCCGGCGGGG TGTCCAGCCTCGACGATCTGCGCGCGATCGCCACGTTGACCGACCGGGGCGTCGAGGGTGCGATCGTCGGCAAAGCGCTG TACGCCGGGCGCTTCACGCTGCCCGAGGCGCTGGCAGCGATGGGGCAGTAG
Upstream 100 bases:
>100_bases GAGGATGGTCCGCTCTCGGCCACCCAGTTCCACCCGGAGAAGAGCGGTGACGCGGGCGCGGCACTGCTCCGCAACTGGGT CGAGGAGCTCTGATCTAAGG
Downstream 100 bases:
>100_bases GGCGTCGATGGCACTGGACGAGACCGACCTGCAGGGTCTGGTCGACGAGGCCGCGGCGATACTCGACGCCGCGTCCGAAC CCTTCATCAGCGGGCACCGC
Product: phosphoribosyl isomerase A
Products: NA
Alternate protein names: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSVVPEKSVSEKRPLILLPAVDVVEGRAVRLVQGKAGSETEYGSALDAALGWQRDGAEWIHLVDLDAAFGRGSNRELLAD VVGRLDVAVELSGGIRDDESLEAALATGCARVNIGTAALENPQWCAKVVAEFGDKVAVGLDVKIVDDQHRLRGRGWETDG GDLWEVLDRLDSEGCSRYVVTDVTKDGTLQGPNLDLLGRVADRTDAPVIASGGVSSLDDLRAIATLTDRGVEGAIVGKAL YAGRFTLPEALAAMGQ
Sequences:
>Translated_256_residues MSVVPEKSVSEKRPLILLPAVDVVEGRAVRLVQGKAGSETEYGSALDAALGWQRDGAEWIHLVDLDAAFGRGSNRELLAD VVGRLDVAVELSGGIRDDESLEAALATGCARVNIGTAALENPQWCAKVVAEFGDKVAVGLDVKIVDDQHRLRGRGWETDG GDLWEVLDRLDSEGCSRYVVTDVTKDGTLQGPNLDLLGRVADRTDAPVIASGGVSSLDDLRAIATLTDRGVEGAIVGKAL YAGRFTLPEALAAMGQ >Mature_255_residues SVVPEKSVSEKRPLILLPAVDVVEGRAVRLVQGKAGSETEYGSALDAALGWQRDGAEWIHLVDLDAAFGRGSNRELLADV VGRLDVAVELSGGIRDDESLEAALATGCARVNIGTAALENPQWCAKVVAEFGDKVAVGLDVKIVDDQHRLRGRGWETDGG DLWEVLDRLDSEGCSRYVVTDVTKDGTLQGPNLDLLGRVADRTDAPVIASGGVSSLDDLRAIATLTDRGVEGAIVGKALY AGRFTLPEALAAMGQ
Specific function: Involved in both the histidine and tryptophan biosynthetic pathways [H]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=247, Percent_Identity=34.8178137651822, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1788336, Length=252, Percent_Identity=23.015873015873, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR010188 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16; =5.3.1.24 [H]
Molecular weight: Translated: 27031; Mature: 26899
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVPEKSVSEKRPLILLPAVDVVEGRAVRLVQGKAGSETEYGSALDAALGWQRDGAEWI CCCCCCCCCCCCCCEEEECCCHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEE HLVDLDAAFGRGSNRELLADVVGRLDVAVELSGGIRDDESLEAALATGCARVNIGTAALE EEEEEHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCEEECCHHHCC NPQWCAKVVAEFGDKVAVGLDVKIVDDQHRLRGRGWETDGGDLWEVLDRLDSEGCSRYVV CHHHHHHHHHHCCCEEEEEEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEE TDVTKDGTLQGPNLDLLGRVADRTDAPVIASGGVSSLDDLRAIATLTDRGVEGAIVGKAL EECCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEHHHH YAGRFTLPEALAAMGQ HCCCCCHHHHHHHHCC >Mature Secondary Structure SVVPEKSVSEKRPLILLPAVDVVEGRAVRLVQGKAGSETEYGSALDAALGWQRDGAEWI CCCCCCCCCCCCCEEEECCCHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEE HLVDLDAAFGRGSNRELLADVVGRLDVAVELSGGIRDDESLEAALATGCARVNIGTAALE EEEEEHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCEEECCHHHCC NPQWCAKVVAEFGDKVAVGLDVKIVDDQHRLRGRGWETDGGDLWEVLDRLDSEGCSRYVV CHHHHHHHHHHCCCEEEEEEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEE TDVTKDGTLQGPNLDLLGRVADRTDAPVIASGGVSSLDDLRAIATLTDRGVEGAIVGKAL EECCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEHHHH YAGRFTLPEALAAMGQ HCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA