| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is glnH [H]
Identifier: 108800000
GI number: 108800000
Start: 3205100
End: 3206035
Strand: Reverse
Name: glnH [H]
Synonym: Mmcs_3034
Alternate gene names: 108800000
Gene position: 3206035-3205100 (Counterclockwise)
Preceding gene: 108800007
Following gene: 108799999
Centisome position: 56.19
GC content: 65.28
Gene sequence:
>936_bases ATGCAAGAGAAAGAGGCAACAGTGTCACGATGCCAGATCCGTACGGGGAAGATGTGGCGTATCGCAGCGATCTTTGCTGT CAGCGGCGCGATGGCGCTGTCCGGGTGCGCGCAGAACACCGACACCAGTGGTCCCGCGGAGGAGACGACGGCGGCGACCG CGGAGAAGGTCGACGAGATCGCCAACACCCTGCCGCAGCCGATCAAGGACCGCGGTTCGCTCATCGTCGGCGTCAACGTG CCCTACGCCCCGAACGAGTTCAAGGATCCCAGCGGCAAGATCGTCGGCTTCGACGTCGACCTGATGAACGCGATCGCCTC GACGCTCGGCGTGACGGCCGAATACCGCGAATCGGACTTCGAGAAGATCATCCCGTCCATCCAGGGCGGCACCTACGACG TCGGCATGTCGTCGTTCACCGACACCAAGGAACGTGAGGCGTCGGTCGACTTCGTGACCTACTTCTCGGCGGGCATCCAG TGGGCGCAGAAGGCGGGCGCCGGTATCGATCCCGCCAACGCCTGTGGCAAGCGGGTCGCCGTGCAGTCGACGACCATCGA AGAGACCGAGGAACTCCCGGCCAAGAGCAAGGCCTGCACCGACGCCGGCAAGCCGGCCATCGAGATCGTCAAGTTCGACG AGCAGGACGCGGTGGCCAACGCCGTTGTGCTCGGCCAGGCCGATGCGATGTCGGCGGACTCGCCGGTCACCGCCTACGCC GTCAAGCAGAGCAACGGCAAGCTCGAGACGGCCGGCGAGATCTTCGACGCCGCGCCCTACGGGTGGCCCGTCGCCAAGGG GTCGCCGCTGGGGCAGTCGCTGCAGCAGGCGCTCGAGCACCTCATCGAAACCGGCGCCTATGAACAGATCGCGAAGAACT GGGGTGTCGAGGACGGGATGATCGACAAACCGGTGATCAACGGCGCGATCAGCTAG
Upstream 100 bases:
>100_bases CCTGTGGCTTCGGTGCTGGGTCGTTAATGTTCCGTTACCGGAAGTGCGTGCTGCGACCGCGATGGTTAACGTCGTCGGTT TGGAGACCGGGGACGGTCCG
Downstream 100 bases:
>100_bases CGGAGTCGACCCAACACGATGACCGATGCCGATTCGTCGCCGCGCACCGACGCCGCTCCCATCGATGCCGTTCCCCTGCG ACATCCCTGGCGGTGGGTGG
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MQEKEATVSRCQIRTGKMWRIAAIFAVSGAMALSGCAQNTDTSGPAEETTAATAEKVDEIANTLPQPIKDRGSLIVGVNV PYAPNEFKDPSGKIVGFDVDLMNAIASTLGVTAEYRESDFEKIIPSIQGGTYDVGMSSFTDTKEREASVDFVTYFSAGIQ WAQKAGAGIDPANACGKRVAVQSTTIEETEELPAKSKACTDAGKPAIEIVKFDEQDAVANAVVLGQADAMSADSPVTAYA VKQSNGKLETAGEIFDAAPYGWPVAKGSPLGQSLQQALEHLIETGAYEQIAKNWGVEDGMIDKPVINGAIS
Sequences:
>Translated_311_residues MQEKEATVSRCQIRTGKMWRIAAIFAVSGAMALSGCAQNTDTSGPAEETTAATAEKVDEIANTLPQPIKDRGSLIVGVNV PYAPNEFKDPSGKIVGFDVDLMNAIASTLGVTAEYRESDFEKIIPSIQGGTYDVGMSSFTDTKEREASVDFVTYFSAGIQ WAQKAGAGIDPANACGKRVAVQSTTIEETEELPAKSKACTDAGKPAIEIVKFDEQDAVANAVVLGQADAMSADSPVTAYA VKQSNGKLETAGEIFDAAPYGWPVAKGSPLGQSLQQALEHLIETGAYEQIAKNWGVEDGMIDKPVINGAIS >Mature_311_residues MQEKEATVSRCQIRTGKMWRIAAIFAVSGAMALSGCAQNTDTSGPAEETTAATAEKVDEIANTLPQPIKDRGSLIVGVNV PYAPNEFKDPSGKIVGFDVDLMNAIASTLGVTAEYRESDFEKIIPSIQGGTYDVGMSSFTDTKEREASVDFVTYFSAGIQ WAQKAGAGIDPANACGKRVAVQSTTIEETEELPAKSKACTDAGKPAIEIVKFDEQDAVANAVVLGQADAMSADSPVTAYA VKQSNGKLETAGEIFDAAPYGWPVAKGSPLGQSLQQALEHLIETGAYEQIAKNWGVEDGMIDKPVINGAIS
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=229, Percent_Identity=33.1877729257642, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1788228, Length=237, Percent_Identity=26.5822784810127, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1788648, Length=245, Percent_Identity=26.9387755102041, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787088, Length=220, Percent_Identity=29.0909090909091, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788649, Length=243, Percent_Identity=27.5720164609054, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32779; Mature: 32779
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKEATVSRCQIRTGKMWRIAAIFAVSGAMALSGCAQNTDTSGPAEETTAATAEKVDEI CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ANTLPQPIKDRGSLIVGVNVPYAPNEFKDPSGKIVGFDVDLMNAIASTLGVTAEYRESDF HHHCCCCHHCCCCEEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHH EKIIPSIQGGTYDVGMSSFTDTKEREASVDFVTYFSAGIQWAQKAGAGIDPANACGKRVA HHHHHHHCCCEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEE VQSTTIEETEELPAKSKACTDAGKPAIEIVKFDEQDAVANAVVLGQADAMSADSPVTAYA EECCCHHHHHHCCCCHHHHHCCCCCEEEEEEECCHHHHHHEEEECCCCCCCCCCCEEEEE VKQSNGKLETAGEIFDAAPYGWPVAKGSPLGQSLQQALEHLIETGAYEQIAKNWGVEDGM EECCCCCEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC IDKPVINGAIS CCCHHHCCCCC >Mature Secondary Structure MQEKEATVSRCQIRTGKMWRIAAIFAVSGAMALSGCAQNTDTSGPAEETTAATAEKVDEI CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ANTLPQPIKDRGSLIVGVNVPYAPNEFKDPSGKIVGFDVDLMNAIASTLGVTAEYRESDF HHHCCCCHHCCCCEEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHH EKIIPSIQGGTYDVGMSSFTDTKEREASVDFVTYFSAGIQWAQKAGAGIDPANACGKRVA HHHHHHHCCCEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEE VQSTTIEETEELPAKSKACTDAGKPAIEIVKFDEQDAVANAVVLGQADAMSADSPVTAYA EECCCHHHHHHCCCCHHHHHCCCCCEEEEEEECCHHHHHHEEEECCCCCCCCCCCEEEEE VKQSNGKLETAGEIFDAAPYGWPVAKGSPLGQSLQQALEHLIETGAYEQIAKNWGVEDGM EECCCCCEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC IDKPVINGAIS CCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]