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The map label for this gene is yecS [H]

Identifier: 108799999

GI number: 108799999

Start: 3204158

End: 3205081

Strand: Reverse

Name: yecS [H]

Synonym: Mmcs_3033

Alternate gene names: 108799999

Gene position: 3205081-3204158 (Counterclockwise)

Preceding gene: 108800000

Following gene: 108799998

Centisome position: 56.18

GC content: 64.29

Gene sequence:

>924_bases
ATGACCGATGCCGATTCGTCGCCGCGCACCGACGCCGCTCCCATCGATGCCGTTCCCCTGCGACATCCCTGGCGGTGGGT
GGCGGCGGTCGTCATCGTCGTCCTGGTCGGGCTGTTCCTCTACGGCGCGGCGACCAACGAGGCCTACAGTTGGTCGACCT
ACCGCAAATACCTGTTCGACCAACGCATTTCCGAGGCGGCCTGGAACACCCTGCAGCTGACCATCCTCTCGATGGTTCTC
GCGCTGGTACTCGGGGTGCTCCTGGCCGTGATGCGGCTGTCGCCCAACCCGGTGTTCAAATCGGTTGCCTGGGTGTACCT
GTGGATCTTCCGCGGCACTCCCGTGTACGTGCAGTTGGTCTTCTGGGGGCTGTTCCCGACGCTGTACCAGAACATCAGGA
TCGGCATACCGTTCGGTCCGTCGTTCTTCGAGATGAACCTGCAGGGGCTGTCGATCAGCTTCACCCTGGCGATCATCGGC
CTGGGTCTCAACGAGGCCGCGTACATGGCCGAGATCATCAGGGCGGGAATCAGTTCCGTGCCGGAAGGGCAGTCCGAGGC
GTCCACGGCGCTGGGCATGTCGTGGACGATGACGATGCGGCGCACCGTCCTCCCGCAGGCGATGCGCGTCATCATCCCAC
CCACCGGCAACGAGATCATCAGCATGCTCAAGACCACGTCGCTGGTCACGGCCGTGCCGTACAGCATGGAGCTCTACGGG
CGGGCGCGCGACATCGCCGGGGTCATCTTCCAGCCCATCCCGCTGCTCATGGTCGCCGCCACGTGGTACCTCGCGATCAC
CAGCGTGCTGATGGTCGGTCAGTACTACCTCGAGCGCTATTTCTCCCGCGGCGCCTCGCGCAAGCTGACCACCAAACAGC
TCGAGGCGCTCGCCAAGGCGCAGAGAGTGGGTGAACATCCGTGA

Upstream 100 bases:

>100_bases
CGCCTATGAACAGATCGCGAAGAACTGGGGTGTCGAGGACGGGATGATCGACAAACCGGTGATCAACGGCGCGATCAGCT
AGCGGAGTCGACCCAACACG

Downstream 100 bases:

>100_bases
CGACGCCGATGGTGAAGGCGGAGCTCGTCTGCAAGAACTTCGGTGCGCTGCAGGTACTGAAGGGTGTGACGCTCGAAGTT
CAACGGGGTGAGGTGCTTTG

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTDADSSPRTDAAPIDAVPLRHPWRWVAAVVIVVLVGLFLYGAATNEAYSWSTYRKYLFDQRISEAAWNTLQLTILSMVL
ALVLGVLLAVMRLSPNPVFKSVAWVYLWIFRGTPVYVQLVFWGLFPTLYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIG
LGLNEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNEIISMLKTTSLVTAVPYSMELYG
RARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQYYLERYFSRGASRKLTTKQLEALAKAQRVGEHP

Sequences:

>Translated_307_residues
MTDADSSPRTDAAPIDAVPLRHPWRWVAAVVIVVLVGLFLYGAATNEAYSWSTYRKYLFDQRISEAAWNTLQLTILSMVL
ALVLGVLLAVMRLSPNPVFKSVAWVYLWIFRGTPVYVQLVFWGLFPTLYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIG
LGLNEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNEIISMLKTTSLVTAVPYSMELYG
RARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQYYLERYFSRGASRKLTTKQLEALAKAQRVGEHP
>Mature_306_residues
TDADSSPRTDAAPIDAVPLRHPWRWVAAVVIVVLVGLFLYGAATNEAYSWSTYRKYLFDQRISEAAWNTLQLTILSMVLA
LVLGVLLAVMRLSPNPVFKSVAWVYLWIFRGTPVYVQLVFWGLFPTLYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIGL
GLNEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNEIISMLKTTSLVTAVPYSMELYGR
ARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQYYLERYFSRGASRKLTTKQLEALAKAQRVGEHP

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=221, Percent_Identity=38.0090497737557, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788645, Length=205, Percent_Identity=39.5121951219512, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787030, Length=216, Percent_Identity=32.4074074074074, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1786873, Length=168, Percent_Identity=38.0952380952381, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788646, Length=238, Percent_Identity=31.5126050420168, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786874, Length=201, Percent_Identity=28.8557213930348, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=30.5309734513274, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787086, Length=197, Percent_Identity=31.9796954314721, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI87082239, Length=187, Percent_Identity=28.8770053475936, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI48994930, Length=76, Percent_Identity=44.7368421052632, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34139; Mature: 34007

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDADSSPRTDAAPIDAVPLRHPWRWVAAVVIVVLVGLFLYGAATNEAYSWSTYRKYLFD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
QRISEAAWNTLQLTILSMVLALVLGVLLAVMRLSPNPVFKSVAWVYLWIFRGTPVYVQLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
FWGLFPTLYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIGLGLNEAAYMAEIIRAGISSV
HHHHHHHHHCCEEECCCCCCHHHEEECCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHCC
PEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNEIISMLKTTSLVTAVPYSMELYG
CCCCHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHH
RARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQYYLERYFSRGASRKLTTKQLEALAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QRVGEHP
HHCCCCC
>Mature Secondary Structure 
TDADSSPRTDAAPIDAVPLRHPWRWVAAVVIVVLVGLFLYGAATNEAYSWSTYRKYLFD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
QRISEAAWNTLQLTILSMVLALVLGVLLAVMRLSPNPVFKSVAWVYLWIFRGTPVYVQLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
FWGLFPTLYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIGLGLNEAAYMAEIIRAGISSV
HHHHHHHHHCCEEECCCCCCHHHEEECCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHCC
PEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNEIISMLKTTSLVTAVPYSMELYG
CCCCHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHH
RARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQYYLERYFSRGASRKLTTKQLEALAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QRVGEHP
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]