| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108799997
Identifier: 108799997
GI number: 108799997
Start: 3202251
End: 3203396
Strand: Reverse
Name: 108799997
Synonym: Mmcs_3031
Alternate gene names: NA
Gene position: 3203396-3202251 (Counterclockwise)
Preceding gene: 108799998
Following gene: 108799996
Centisome position: 56.15
GC content: 71.99
Gene sequence:
>1146_bases GTGCCGCAGCGGGCGGACCCCGCGACCCCGTTGTGGCGGGCGGCGCAGGTGTTCCGGCTGCTGAGCTGGGTGTACGCGCT GGGCTTTCAGCTCTCGGTCAACGACGACCTCGACCGCCGCGCGGTCGCGTGGGCGCTGTTCGCGGTGCTGACCGTCTTCA GCGTCGTCTGGGCCGTCGCCTATCTGCGGGGGTTCGGACGCACGCCGGTGTGGGTGGCCGCCGAGGTCGGTGTCGTGGCC GCGCTGATGCTGTCGACCGGGCTGGTGGCCGACGCGCAGTGGGTGGCCGACAACCAGTCCTGGCCGACGACGCTGTGGGC CACCAACGCCGTGATCTCGGCGGCGATCCTGCGGGGGCCGGTGGCGGGCATGGCGACCGGTCTGGTGGTGATGGCGGCCT ACGCGGTGCTCAAGGGTCACGTCAGCATCAACGTGTTCCGCAACGCCACGATCGTCATCGAGTTGGCGGTGGGGTTGGTG GTGGGCATGGCCGCCCAGACCGCCCGCCGCGCGCACGCCGAACTCGAACGCGCCACCCGACTGGCGGCCGCACTCGAAGA ACGTGAGCGACTCTCCCGCCACGTACACGACGGCGCCATCCAGGTGCTGGCCCTCGTCGCCCGGCGGGGTCGGGAGATCG GTGGGCCGACAGCGCAATTGGCCGAGTTGGCCGGTGAGCAGGAACGTGCGCTGCGCCGCCTGGTCAGTGACGCCGACACC GCCGATGCGCTCGGCGCGGACGCCGACATCGGTGCGATGCTGCGCCGTCGCGCCTCCGACCGGGTGTCGGTCAGCCTGCC GCCCGAACCCGTGCTGTTGGACGCCGATGTCGCCGCCGAACTCTGCGCCGCCGCGGTGAACGCGCTCGACAACGTGGCCG CCCACGCCGGTCCGAAGGCTCGGGCCTTCGTGCTGGTGGAGGATCTCGGTGACGCCGTGACGGTGAGCGTGCGCGACGAC GGGGTGGGCATACCTCCCGGCCGGCTGGCGGAGGCCGCCGCCGAGGGGAGGATGGGCGTGGCGAAATCCATTGTGGGACG GATCGATTCCCTCGGTGGCACGGCCGAGTTGTACACCGAGCCGGGACGCGGCACGGAATGGGAGCTGACGGTGCCCCGCA GACGGCAGGATGGTGGCCGTGGCTGA
Upstream 100 bases:
>100_bases CATGGACGAGGGTGTCATCGTCGAGGCCGGGAATCCGCGCGAGATGATGGCCAACCCGCAGCATGAACGCACGAAAGCCT TCCTGTCCAAGGTGATGTAG
Downstream 100 bases:
>100_bases CGACCAGCCGACCACCGTGATGGTGGTCGACGATCACCCCATCTGGCGGGACGCGGTGGCCCGCGACCTTGCCGACGAAG GCTTCTCCGTGGTCGCGACC
Product: putative signal transduction histidine kinase
Products: NA
Alternate protein names: Signal Transduction Histidine Kinase; Two-Component Sensor Kinase; Sensor Kinase Two-Component System; LOW QUALITY PROTEIN Two-Component System Sensor Kinase; Two-Component System Histidine Kinase; Two-Component Histidine Kinase; Signal Transduction Histidine Kinase-Like Protein
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPQRADPATPLWRAAQVFRLLSWVYALGFQLSVNDDLDRRAVAWALFAVLTVFSVVWAVAYLRGFGRTPVWVAAEVGVVA ALMLSTGLVADAQWVADNQSWPTTLWATNAVISAAILRGPVAGMATGLVVMAAYAVLKGHVSINVFRNATIVIELAVGLV VGMAAQTARRAHAELERATRLAAALEERERLSRHVHDGAIQVLALVARRGREIGGPTAQLAELAGEQERALRRLVSDADT ADALGADADIGAMLRRRASDRVSVSLPPEPVLLDADVAAELCAAAVNALDNVAAHAGPKARAFVLVEDLGDAVTVSVRDD GVGIPPGRLAEAAAEGRMGVAKSIVGRIDSLGGTAELYTEPGRGTEWELTVPRRRQDGGRG
Sequences:
>Translated_381_residues MPQRADPATPLWRAAQVFRLLSWVYALGFQLSVNDDLDRRAVAWALFAVLTVFSVVWAVAYLRGFGRTPVWVAAEVGVVA ALMLSTGLVADAQWVADNQSWPTTLWATNAVISAAILRGPVAGMATGLVVMAAYAVLKGHVSINVFRNATIVIELAVGLV VGMAAQTARRAHAELERATRLAAALEERERLSRHVHDGAIQVLALVARRGREIGGPTAQLAELAGEQERALRRLVSDADT ADALGADADIGAMLRRRASDRVSVSLPPEPVLLDADVAAELCAAAVNALDNVAAHAGPKARAFVLVEDLGDAVTVSVRDD GVGIPPGRLAEAAAEGRMGVAKSIVGRIDSLGGTAELYTEPGRGTEWELTVPRRRQDGGRG >Mature_380_residues PQRADPATPLWRAAQVFRLLSWVYALGFQLSVNDDLDRRAVAWALFAVLTVFSVVWAVAYLRGFGRTPVWVAAEVGVVAA LMLSTGLVADAQWVADNQSWPTTLWATNAVISAAILRGPVAGMATGLVVMAAYAVLKGHVSINVFRNATIVIELAVGLVV GMAAQTARRAHAELERATRLAAALEERERLSRHVHDGAIQVLALVARRGREIGGPTAQLAELAGEQERALRRLVSDADTA DALGADADIGAMLRRRASDRVSVSLPPEPVLLDADVAAELCAAAVNALDNVAAHAGPKARAFVLVEDLGDAVTVSVRDDG VGIPPGRLAEAAAEGRMGVAKSIVGRIDSLGGTAELYTEPGRGTEWELTVPRRRQDGGRG
Specific function: Unknown
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40243; Mature: 40111
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQRADPATPLWRAAQVFRLLSWVYALGFQLSVNDDLDRRAVAWALFAVLTVFSVVWAVA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH YLRGFGRTPVWVAAEVGVVAALMLSTGLVADAQWVADNQSWPTTLWATNAVISAAILRGP HHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCC VAGMATGLVVMAAYAVLKGHVSINVFRNATIVIELAVGLVVGMAAQTARRAHAELERATR HHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAALEERERLSRHVHDGAIQVLALVARRGREIGGPTAQLAELAGEQERALRRLVSDADT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCC ADALGADADIGAMLRRRASDRVSVSLPPEPVLLDADVAAELCAAAVNALDNVAAHAGPKA HHHCCCCCHHHHHHHHHCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCC RAFVLVEDLGDAVTVSVRDDGVGIPPGRLAEAAAEGRMGVAKSIVGRIDSLGGTAELYTE EEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEC PGRGTEWELTVPRRRQDGGRG CCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure PQRADPATPLWRAAQVFRLLSWVYALGFQLSVNDDLDRRAVAWALFAVLTVFSVVWAVA CCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH YLRGFGRTPVWVAAEVGVVAALMLSTGLVADAQWVADNQSWPTTLWATNAVISAAILRGP HHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCC VAGMATGLVVMAAYAVLKGHVSINVFRNATIVIELAVGLVVGMAAQTARRAHAELERATR HHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAALEERERLSRHVHDGAIQVLALVARRGREIGGPTAQLAELAGEQERALRRLVSDADT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCC ADALGADADIGAMLRRRASDRVSVSLPPEPVLLDADVAAELCAAAVNALDNVAAHAGPKA HHHCCCCCHHHHHHHHHCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCC RAFVLVEDLGDAVTVSVRDDGVGIPPGRLAEAAAEGRMGVAKSIVGRIDSLGGTAELYTE EEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEC PGRGTEWELTVPRRRQDGGRG CCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA