| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is argR [H]
Identifier: 108799933
GI number: 108799933
Start: 3132134
End: 3132613
Strand: Reverse
Name: argR [H]
Synonym: Mmcs_2967
Alternate gene names: 108799933
Gene position: 3132613-3132134 (Counterclockwise)
Preceding gene: 108799934
Following gene: 108799932
Centisome position: 54.91
GC content: 70.83
Gene sequence:
>480_bases ATGACTTCCGCGGTGACCAGAGCCGGACGACAGGCCCGTATCGTGGCGATCCTGTCGTCGCATTCCGTGCGCAGCCAGGG TGAGCTGGCCGCCAAGCTCGCCGACGAGGGGATCGAGGTCACCCAGGCCACGCTGTCACGCGACCTCGAGGAACTCGGTG CGGTCAAACTGCGCGGCGCCGACGGCGGCGTCGGCGTCTACGTCGTCCCCGAGGACGGCAGCCCCGTGCGGGGTGTCGCA GGCGGCACCGACCGGCTCACCCGGCTGCTCGGTGACCTCCTGGTGTCCACGGACGCCAGCGGCAACCTCGCCGTACTGCG CACGCCGCCCGGTGCGGCACACTATCTCGCCAGCGCGCTCGATCGGGCCGCGCTGCCGTACGTCGTCGGCACCATCGCCG GCGACGACACCATCATGGTGGTGGCCCGCGAGCCCATGACGGGCGTCGAGCTGGCCGCCACCCTTGAGAACCTGAAGTAA
Upstream 100 bases:
>100_bases GACGGCCCGCACAGCGCGGTGTGGGACGAAGCGGAGAACCGGCTGCACGCGCAGAAGGCGCTGCTGGTGTGGCTGCTGGA GCGGTCGGGGTGACGGTGTC
Downstream 100 bases:
>100_bases GAGGAGATTGGTCATGTCCGAACGCGTCATCCTGGCGTACTCCGGCGGTCTGGACACCTCGGTGGCGATCAGCTGGATCG GCAAGGAGACCGGGCGCGAG
Product: arginine repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTSAVTRAGRQARIVAILSSHSVRSQGELAAKLADEGIEVTQATLSRDLEELGAVKLRGADGGVGVYVVPEDGSPVRGVA GGTDRLTRLLGDLLVSTDASGNLAVLRTPPGAAHYLASALDRAALPYVVGTIAGDDTIMVVAREPMTGVELAATLENLK
Sequences:
>Translated_159_residues MTSAVTRAGRQARIVAILSSHSVRSQGELAAKLADEGIEVTQATLSRDLEELGAVKLRGADGGVGVYVVPEDGSPVRGVA GGTDRLTRLLGDLLVSTDASGNLAVLRTPPGAAHYLASALDRAALPYVVGTIAGDDTIMVVAREPMTGVELAATLENLK >Mature_158_residues TSAVTRAGRQARIVAILSSHSVRSQGELAAKLADEGIEVTQATLSRDLEELGAVKLRGADGGVGVYVVPEDGSPVRGVAG GTDRLTRLLGDLLVSTDASGNLAVLRTPPGAAHYLASALDRAALPYVVGTIAGDDTIMVVAREPMTGVELAATLENLK
Specific function: Regulates arginine biosynthesis genes [H]
COG id: COG1438
COG function: function code K; Arginine repressor
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgR family [H]
Homologues:
Organism=Escherichia coli, GI1789633, Length=127, Percent_Identity=35.4330708661417, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001669 - InterPro: IPR020899 - InterPro: IPR020900 - InterPro: IPR011991 - ProDom: PD007402 [H]
Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C [H]
EC number: NA
Molecular weight: Translated: 16302; Mature: 16171
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAVTRAGRQARIVAILSSHSVRSQGELAAKLADEGIEVTQATLSRDLEELGAVKLRGA CCCHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECC DGGVGVYVVPEDGSPVRGVAGGTDRLTRLLGDLLVSTDASGNLAVLRTPPGAAHYLASAL CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH DRAALPYVVGTIAGDDTIMVVAREPMTGVELAATLENLK HHHCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHCC >Mature Secondary Structure TSAVTRAGRQARIVAILSSHSVRSQGELAAKLADEGIEVTQATLSRDLEELGAVKLRGA CCHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECC DGGVGVYVVPEDGSPVRGVAGGTDRLTRLLGDLLVSTDASGNLAVLRTPPGAAHYLASAL CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH DRAALPYVVGTIAGDDTIMVVAREPMTGVELAATLENLK HHHCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]