| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799721
Identifier: 108799721
GI number: 108799721
Start: 2901048
End: 2901542
Strand: Reverse
Name: 108799721
Synonym: Mmcs_2755
Alternate gene names: NA
Gene position: 2901542-2901048 (Counterclockwise)
Preceding gene: 108799722
Following gene: 108799720
Centisome position: 50.86
GC content: 67.68
Gene sequence:
>495_bases ATGAGCCGAATCGGAGACGCCGCCCGGGACTTCGCCGACGATGACGTGACGGCCTTCGCGGTTCGTTCACCCGATCTCGG CGCGGCGATGGCCGCCTTCAGCCAGGCCGTCTACACCAAGGGCCGCCTGCCGTTGCGGGTGCGGGAACTGGCGCGGGTCG TCATCGCCAACGCGAACGAGTGTGTGGTGTGCCAGAACACCCGTGACTCAGACGGCGAGGCGGCAGGCGTCGACGAGGAT CTCTACCGCTACAGCGACCAGTGGCGCACCTGGCCGGGGTACAGCCCCGCCGAACGCATCGCCGCGGAGTTCGCCCACCG GTTCGCCACCGATCACATCGGCCTGCGCGAGGACGACGACTTCTGGGCACGCGCGGCCGAGCACTTCGACGCCGATCTGA TCACCGATCTCGCGCTGTCGTGCGCCATGTGGGTCGGGATGGGTCGAGTCCTGCGGACACTCGACATCGGGCAGAGCTGC AAGATCACTCTGTAG
Upstream 100 bases:
>100_bases TGGAACGGATCACCCACCGCATGCTCGTACAGCGCGACTGGGATTGGGACGACGAACTCGAACGCGCTCAGTGATCCCGG CCTGCGCGTAGCATGCGGCC
Downstream 100 bases:
>100_bases ATTCGGGACGCCTGCGGGTGGCCACGAGGTGAACAATGGTCGCCATGGCAGCCAAACCCCTCGCCGCAGCCGCTATCGCG CAGCTCGAGTCCGACGGCGT
Product: carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSRIGDAARDFADDDVTAFAVRSPDLGAAMAAFSQAVYTKGRLPLRVRELARVVIANANECVVCQNTRDSDGEAAGVDED LYRYSDQWRTWPGYSPAERIAAEFAHRFATDHIGLREDDDFWARAAEHFDADLITDLALSCAMWVGMGRVLRTLDIGQSC KITL
Sequences:
>Translated_164_residues MSRIGDAARDFADDDVTAFAVRSPDLGAAMAAFSQAVYTKGRLPLRVRELARVVIANANECVVCQNTRDSDGEAAGVDED LYRYSDQWRTWPGYSPAERIAAEFAHRFATDHIGLREDDDFWARAAEHFDADLITDLALSCAMWVGMGRVLRTLDIGQSC KITL >Mature_163_residues SRIGDAARDFADDDVTAFAVRSPDLGAAMAAFSQAVYTKGRLPLRVRELARVVIANANECVVCQNTRDSDGEAAGVDEDL YRYSDQWRTWPGYSPAERIAAEFAHRFATDHIGLREDDDFWARAAEHFDADLITDLALSCAMWVGMGRVLRTLDIGQSCK ITL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18177; Mature: 18046
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIGDAARDFADDDVTAFAVRSPDLGAAMAAFSQAVYTKGRLPLRVRELARVVIANANE CCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC CVVCQNTRDSDGEAAGVDEDLYRYSDQWRTWPGYSPAERIAAEFAHRFATDHIGLREDDD EEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHH FWARAAEHFDADLITDLALSCAMWVGMGRVLRTLDIGQSCKITL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC >Mature Secondary Structure SRIGDAARDFADDDVTAFAVRSPDLGAAMAAFSQAVYTKGRLPLRVRELARVVIANANE CCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC CVVCQNTRDSDGEAAGVDEDLYRYSDQWRTWPGYSPAERIAAEFAHRFATDHIGLREDDD EEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHH FWARAAEHFDADLITDLALSCAMWVGMGRVLRTLDIGQSCKITL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA