| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yrbG [H]
Identifier: 108799608
GI number: 108799608
Start: 2796264
End: 2796791
Strand: Reverse
Name: yrbG [H]
Synonym: Mmcs_2641
Alternate gene names: 108799608
Gene position: 2796791-2796264 (Counterclockwise)
Preceding gene: 108799609
Following gene: 108799606
Centisome position: 49.02
GC content: 65.15
Gene sequence:
>528_bases GTGTGGTTTGACGACTGGGACGACCTCCTGCGGGTGCTGATCGCCGGCACCGTCGCGTATGCCGTGCTCATCTTGGTGCT ACGCATGTCGGGCAAACGCACGTTGGCCAAATTGAATGCCTTCGACCTCGTGGTGACTGTGGCCGTCGGCTCCACGCTGG CCACGGTTTTCCTCAACTCCAGCGTGTCGGTCACCGAGGGGATCGTCGCACTGATCCTGTTGGCAGCGCTTCAGTACGTC GCCGCCATCGTGGCATCCCGGCTGCGTATCGGGCGCGCGGTGCTCACGTCCCGCCCGTCGTTGCTTTTCGCCCATGGATC CTTTCGCGACGATGCGATGCGGAAGCAACGAGTCAGCCGCGCCGACGTGCGACAGGCGGTCCGTTCGTCCGGTCGCGGCG GTCTGAATGACGTCGGCGCGGTGGTCCTCGAATCCGACGGGTCCCTCAGCGTCATCACCACGGCCGACTTGGGTGACCAC TCCGCCTTGATCGACGTGGATGGCCAGGTCCCGCCAGCACCCGGGTAA
Upstream 100 bases:
>100_bases GGCCGCACTGTGTGTCGTCGGTCCCTTCATCGGCACCGTCTGATGCGCCGCCCGGTCTCATCCCGCGCCCCCCGCGTGGC CGGTCGGGCAGGTGGACTCC
Downstream 100 bases:
>100_bases CGGTCATCGCGCCGTAGAGGTATTGGTGCCGATGAGGTGCTCAAGACGTTTCCGCATCGGCCGCTGCTCCGTCTCCGCAC TTTTCGACGCGCGCACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MWFDDWDDLLRVLIAGTVAYAVLILVLRMSGKRTLAKLNAFDLVVTVAVGSTLATVFLNSSVSVTEGIVALILLAALQYV AAIVASRLRIGRAVLTSRPSLLFAHGSFRDDAMRKQRVSRADVRQAVRSSGRGGLNDVGAVVLESDGSLSVITTADLGDH SALIDVDGQVPPAPG
Sequences:
>Translated_175_residues MWFDDWDDLLRVLIAGTVAYAVLILVLRMSGKRTLAKLNAFDLVVTVAVGSTLATVFLNSSVSVTEGIVALILLAALQYV AAIVASRLRIGRAVLTSRPSLLFAHGSFRDDAMRKQRVSRADVRQAVRSSGRGGLNDVGAVVLESDGSLSVITTADLGDH SALIDVDGQVPPAPG >Mature_175_residues MWFDDWDDLLRVLIAGTVAYAVLILVLRMSGKRTLAKLNAFDLVVTVAVGSTLATVFLNSSVSVTEGIVALILLAALQYV AAIVASRLRIGRAVLTSRPSLLFAHGSFRDDAMRKQRVSRADVRQAVRSSGRGGLNDVGAVVLESDGSLSVITTADLGDH SALIDVDGQVPPAPG
Specific function: Unknown
COG id: COG2323
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0702 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007353 - InterPro: IPR023090 [H]
Pfam domain/function: PF04239 DUF421 [H]
EC number: NA
Molecular weight: Translated: 18471; Mature: 18471
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWFDDWDDLLRVLIAGTVAYAVLILVLRMSGKRTLAKLNAFDLVVTVAVGSTLATVFLNS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC SVSVTEGIVALILLAALQYVAAIVASRLRIGRAVLTSRPSLLFAHGSFRDDAMRKQRVSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH ADVRQAVRSSGRGGLNDVGAVVLESDGSLSVITTADLGDHSALIDVDGQVPPAPG HHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MWFDDWDDLLRVLIAGTVAYAVLILVLRMSGKRTLAKLNAFDLVVTVAVGSTLATVFLNS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC SVSVTEGIVALILLAALQYVAAIVASRLRIGRAVLTSRPSLLFAHGSFRDDAMRKQRVSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH ADVRQAVRSSGRGGLNDVGAVVLESDGSLSVITTADLGDHSALIDVDGQVPPAPG HHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]